Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20guehoae_20[genbank_20GCA_5F001600415.1_202016- 03-01] 35 sequences; 33,698,914 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq2 150 5e-31 seq18 141 3e-28 seq4 98.7 3e-15 >seq2 Length=3829864 Score = 150 bits (166), Expect = 5e-31 Identities = 404/615 (66%), Gaps = 2/615 (0%) Strand=Plus/Plus Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTA 349591 ||||| || || || || ||||| | | || |||||||| | ||||| || || | Sbjct 1732247 CCCGAGGAGATCTCGTCCATGGTCCTCATCAAGATGAAGGAGACCGCTGAGGCCTACCTC 1732306 Query 349592 GGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGT 349651 |||| || || | | ||||| || || || || ||||| || || || | |||||| Sbjct 1732307 GGTGGCACCGTCTCCAAGGCTGTCATCACCGTCCCCGCCTACTTCAACGACTCGCAGCGT 1732366 Query 349652 TCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAA 349711 || || || || ||||| | |||||| || | | || || | || || || || Sbjct 1732367 CAGGCTACCAAGGACGCTGGTACCATTGCCGGCCTCGAGGTCCTCCGTATCATCAACGAG 1732426 Query 349712 CCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATT 349771 ||||| || || || || || || || || || || | | || || || || | Sbjct 1732427 CCCACCGCCGCCGCTATCGCTTACGGCCTCGACAAGAAGTCCGAGGGTGAGAAGAACGTC 1732486 Query 349772 CTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGA 349831 || || || || | ||||||||||| ||||| || || || || || |||| ||||| Sbjct 1732487 CTCATCTTCGACCTTGGTGGTGGTACCTTTGACGTGTCGCTCCTCACCATTGAGGAGGGC 1732546 Query 349832 ATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAAT 349891 || || || || || || || || ||||| || || |||||||| || || ||||| || Sbjct 1732547 ATCTTCGAGGTCAAGGCTACCGCCGGTGACACCCACCTTGGTGGTGAGGACTTTGACAAC 1732606 Query 349892 CGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAG-CTAAAATTGATATTGGAGA 349950 || || || || ||||| | || || ||||| |||| || | || || | Sbjct 1732607 CGCCTTGTCAACCACTTTGTCCAGGAGTTCAAGCG-CAAGAACAAGAAGGACATCACCGG 1732665 Query 349951 TAATCCTAGAGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATC 350010 ||| | | || | ||||| || | || || ||||| ||||| ||||| || | || Sbjct 1732666 CAATGCCCGTGCCCTCCGTCGTCTCCGCACCGCCTGTGAGCGTGCCAAGCGCACCCTTTC 1732725 Query 350011 ATCTACTACCCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTC 350070 || | |||| ||||| ||||| || || || || ||| || | || |||| | Sbjct 1732726 GTCGGCCGCCCAGACCTCGATTGAGATCGACTCGCTCTTTGACGGTATCGACTTCTACAC 1732785 Query 350071 ATCTATTACACGTGCTCGGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGA 350130 || || || ||||| || || || || | || ||| || || | | || ||||| Sbjct 1732786 CTCGATCACCCGTGCCCGTTTCGAGGAGCTCTGCCAGGACCTCTTCCGCTCGACCATGGA 1732845 Query 350131 TCCTGTGGAAAAAGT 350145 || || || || || Sbjct 1732846 GCCCGTTGAGAAGGT 1732860 >seq18 Length=639095 Score = 141 bits (156), Expect = 3e-28 Identities = 172/232 (74%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | ||||| || ||||| || ||||| || || || || ||||| Sbjct 12716 CATACCACCACGCAGGCGGAGAACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAATC 12657 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| ||||| || || || || || || ||||| || || || ||||| ||||| || || Sbjct 12656 AGACAATGTGCGGCCGTCCTCGAGCTGCTTTCCCGCGAAAATGAGACGCTGCTGGTCGGG 12597 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGATGGTT 140685 |||||| || || || ||||| || || ||| || || || || |||| || || | | Sbjct 12596 AGGAATGCCCTCCTTGTCCTGGATCTT-GCTCTTCACGTTGTCGATCGTGTCGGAAGACT 12538 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | || ||||| || | ||||| ||||| || || || || || |||||||| Sbjct 12537 CGACCTCAAGGGTGATGGTCTTGCCGGTAAGGGTCTTGACGAAGATCTGCAT 12486 Score = 96.9 bits (106), Expect = 1e-14 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 140505 TACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAA 140564 |||||||||||||| | | || || || || || || ||||| || || || || || Sbjct 13141 TACATACCACCACGCAGGCGAAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAG 13082 Query 140565 TCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCA 140624 || || | || || || || || || || || || || ||||| ||||| ||||| || Sbjct 13081 TCGGACAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCC 13022 Query 140625 GGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGT 140684 || || || || || || ||||| || || | || || || ||||||| || || | Sbjct 13021 GGGGGGATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCAATCGTGTCCGACGAC 12962 Query 140685 TCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTT 140722 || || || || || | |||||||| || || || || Sbjct 12961 TCGACCTCGAGGGTGATCGTCTTTCCCGTGAGCGTCTT 12924 >seq4 Length=2444010 Score = 98.7 bits (108), Expect = 3e-15 Identities = 204/303 (67%), Gaps = 8/303 (3%) Strand=Plus/Minus Query 349610 GCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCT 349669 || ||| | ||||| || ||||| || || || | |||||| || || || || || Sbjct 684490 GCCGTTGTCACTGTCCCTGCCTACTTCAACGACTCGCAGCGTCTCGCCACCAAGGACGCC 684431 Query 349670 GGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATT 349729 || |||||| || | | ||||| | || || || || ||||||||||| || ||| Sbjct 684430 GGTGCCATTGCTGGCCTTGACGTTCTTCGTATCATCAACGAGCCCACTGCTGCTGCCATT 684371 Query 349730 GCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGT 349789 || || || ||||| | | || | | || || || |||| || || || | || Sbjct 684370 GCCTACGGTCTTGACCAGAAGACCAAGGAGGAGAAGAACGTTCTCATCTTCGACCTTGGC 684311 Query 349790 GGTGGTACTTTTGATGTATCACTACT----AACACTTGAAGAGGGAATTTTTGAAGTTAA 349845 ||||| ||||| |||||||| || || | |||| | || | |||| || || Sbjct 684310 GGTGGCACTTTCGATGTATCCCTTCTCTCGATCACT----GGCGGTGTCTTTGCCGTCAA 684255 Query 349846 AGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCA 349905 || ||||||||||| || || |||||||| || || || || || |||| || ||| Sbjct 684254 GGCCACTGCTGGTGACACCCACCTTGGTGGTGAGGACTTCGACAACACTCTCCTTGAGCA 684195 Query 349906 TTT 349908 || Sbjct 684194 CTT 684192 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515253720503105