Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20guehoae_20[genbank_20GCA_5F001600415.1_202016- 03-01] 35 sequences; 33,698,914 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq1 313 3e-80 seq4 161 1e-34 >seq1 Length=3969531 Score = 313 bits (346), Expect = 3e-80 Identities = 495/702 (71%), Gaps = 18/702 (3%) Strand=Plus/Minus Query 53270 TACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAATCACCCTCAGATGTCG 53329 |||||||||||||| |||| ||||| |||||||| ||||| ||| | || |||||| Sbjct 1697228 TACTTTACGCACGCGTCGCCCACCCTCTTCAACGCCGGTACCCCGCACGCACAAATGTCG 1697169 Query 53330 AGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTCAAG 53389 |||||||| || ||||||||||| |||||||| |||||||||||||| ||||||||| Sbjct 1697168 TCGTGCTTCCTCGTCGCGATGAAGGACGACTCGATTGACGGCATCTACGACACGCTCAAG 1697109 Query 53390 GAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCAC-TGCTCGAACGTCCG 53448 ||||| || ||||||||| | |||||||| ||| ||||| | | | ||| | || Sbjct 1697108 ACCTGTGCGCAGATCTCCAAGACTGCTGGTGGTATTGGTCTCCACATTCAC-AACATTCG 1697050 Query 53449 TGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATGGAATCGTGCCTATGCT 53508 ||| || ||| | || ||| || |||||| | | | || ||||| || ||||| Sbjct 1697049 TGCCAAGGGCTCGTACATTGCGGGTACCAACGGCTACTCGAACGGTATCGTCCCCATGCT 1696990 Query 53509 CCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGGGAAGCGCAAGGGGTC 53568 ||| | || | | |||||||| |||||| ||||||| || |||||| || | Sbjct 1696989 CCGTGCCTACGATGCGACGGCCCGTTACGTCGACCAGGGCGGCAACAAGCGCCCAGGTGC 1696930 Query 53569 GTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGCGTCT 53628 || ||||||||||||||||| |||||||||||| | | || || ||||| || || Sbjct 1696929 CTTTGCCATCTACCTCGAGCCCTGGCACGCCGACGTCTTTGACTTCCTCGACCTCCGCAA 1696870 Query 53629 GAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGTT-TACAGCTCTGTGGATTCCG 53686 ||| || || | || || | || ||| |||||||| || ||| || |||||||| || Sbjct 1696869 GAACCACGGCAAGGAGGAAGTCCG-TGCTCGTGACCTCTTCTAC-GCGCTGTGGATCCCC 1696812 Query 53687 GACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTGATGTGCCCGAACGAG 53746 ||||| |||||| | || |||| ||||| || ||| || |||||||| |||| Sbjct 1696811 GACCTGTTCATGAAGCGTGTCGAGATGGACGGTGACTGGACGCTCATGTGCCCCGCCGAG 1696752 Query 53747 TGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGAGATGTATCGGACGTAC--- 53803 |||||||||||| | |||| || ||||| || | ||| | || | || ||| Sbjct 1696751 TGCCCCGGCCTCGCCGATGTCCACTCGGAGGAATTCGAGGAGCTCTACCTGAGCTACGAG 1696692 Query 53804 ---GCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAGGTATGGGATGCAATC 53860 || | |||||||| |||| | ||||||||| || | ||| ||| || Sbjct 1696691 CGTGCCGGCAAGGGCCGC------AAGACGATCAAGGCGCAAAAGCTCTGGTTTGCCATT 1696638 Query 53861 CTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGGATTCGGTCAACGAG 53920 ||| || ||| ||||| || || | |||| ||||||||| ||| |||| Sbjct 1696637 CTCGAGGCTCAGACTGAGACTGGCGGTCCCTTCATGCTCTACAAGGACGCGGCCAACAGC 1696578 Query 53921 AAGAGCAACCAGAAGAACATCGGCGTCATCAAATCGAGCAAC 53962 ||| |||||| || || ||||| ||||| ||| |||| Sbjct 1696577 AAGTCGAACCAGCAGCACCTCGGCACGATCAAGTCGTCCAAC 1696536 Score = 118 bits (130), Expect = 1e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 55728 TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTG 55787 |||||| ||| ||| |||||| ||||||||| | || ||| | || ||| | || Sbjct 1695787 TCAAGGCGATCTACAAGACGGTTTGGGAGATTTCGCAAAAGGCCGTCATCGACCTCGCTG 1695728 Query 55788 CTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTT 55847 | || ||||| |||| |||||||||||| ||||| || |||||| | || || || | Sbjct 1695727 CCGACCGTGGCGCGTTCATCGACCAGTCGCAGTCGCTTAACATCCACCTGTCCAACCCCT 1695668 Query 55848 CACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTA 55907 | | | || ||| |||||||||||| ||||| |||||| || |||||||| || Sbjct 1695667 CGTTCTCGCAGCTGACCTCGATGCACTTCTACGGCTGGAAGCGTGGTCTCAAGACTGGCG 1695608 Query 55908 TGTACTATCTGCGGACCCGCGCCAAGGCCAAGGCG 55942 ||||| || || |||||| | | ||||| ||| Sbjct 1695607 CCTACTACCTCCGTACCCGCCCGAGCGCCAACGCG 1695573 >seq4 Length=2444010 Score = 161 bits (178), Expect = 1e-34 Identities = 312/454 (69%), Gaps = 5/454 (1%) Strand=Plus/Minus Query 117149 AACCCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAG 117208 ||||| || || ||||| || ||||| || || || | | ||||||| || | ||| Sbjct 744323 AACCC-GTACCAATACCATCGGCACCGTTGATGAGGACAAGCGGCACGGTTGGGAGATAG 744265 Query 117209 AACTCAGGCTCCACCTGCAGACCGTCGTCCGTGACGTACTTGAGCACCGCATTGTCACTC 117268 |||| ||||| | || | || || || |||| || | | || ||| | ||| Sbjct 744264 TACTCGGGCTCGATCTTTTGCCCATCTTCGGTGAGATAGGTCAACAGCGCGTCGTCCGCA 744205 Query 117269 GGATCGAATA-TGTTCTTGGTCCACGGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGC 117327 |||| ||| | ||| | | || | ||| |||||||| ||||| | ||| || Sbjct 744204 GGATGGAAAAGTGTACGCGTCATGCGAGGGATGGCT-GTGAAAATATAACGGGCGCTCGC 744146 Query 117328 AGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAG 117387 ||| |||||||| || ||||| || |||||||| || | || | | ||| | Sbjct 744145 AGCGTCCTTGCCGCCTTGCAGACGAGTTCCGAATTGACCGTTGGGGGAGAGCAAGTTGAT 744086 Query 117388 GTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGGAGGCTCGCCTC 117447 ||||||| ||| ||||||||||| |||| | ||||||||||| || ||| | |||| Sbjct 744085 GTTGTTGCTGCCAACAAAGTTTTGCGCCAGGCCGACAATCGTACTCTGCAGGGACACCTC 744026 Query 117448 ACCATGGTGATACGCCGTCTGCTCCGCCACGTAGCCCGCCAGCTGAGCCACCTTCATGTC 117507 ||| ||||| ||| | || || |||| ||||| || || ||||| || ||||| || || Sbjct 744025 ACCGTGGTGGTACCCAGTGTGTTCCGATACGTAACCAGCGAGCTGTGCAACCTTGATCTC 743966 Query 117508 TGACGTCAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGCGCTGACTTGGCTTCAGACC 117567 | | || || ||||| ||| || | || ||||||||||| | ||||| ||||| Sbjct 743965 CTTCTTGAGATTGCGCTTGAAGCAACCAAACATGACCTTGCGCTGGCCAGGCTTGAGACC 743906 Query 117568 ATCCGCCACGTGA-GGGATCGAACGCTTGATGTC 117600 || || || ||| || || || ||| || |||| Sbjct 743905 GTCGGCAAC-TGACGGAATGGAGCGCATGTTGTC 743873 Score = 138 bits (152), Expect = 1e-27 Identities = 302/450 (67%), Gaps = 2/450 (0%) Strand=Plus/Minus Query 151876 CCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGGCGTAAAAC 151935 || ||||| || || || |||||||||| || | | |||||| | ||| || || Sbjct 744321 CCCGTACCAATACCATCGGCACCGTTGATGAGGACAAGCGGCACGGTTGGGAGATAGTAC 744262 Query 151936 TCCGGCTCCACCTGTTGACCGTCATCCATCACGTATTTCAAAACGGAATTGTCAGCCGGA 151995 || ||||| | || ||| || || || | | || |||| | | | ||| || ||| Sbjct 744261 TCGGGCTCGATCTTTTGCCCATCTTCGGTGAGATAGGTCAACAGCGCGTCGTCCGCAGGA 744202 Query 151996 TCGAATATCCGTCGAGTCATAGGACTCAAACGCGTGAAGATGTATCGGGAGCTGGCCGCA 152055 | ||| | || ||||| || | ||||| || || |||| ||| || || Sbjct 744201 TGGAAAAGTGTACGCGTCATGCGAGGGATGGCTGTGAAAATATAACGGGCGCTCGCAGCG 744142 Query 152056 TCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGAGGTTG 152115 |||||||| ||| ||| || ||||| || || || ||| ||| | ||||| |||| Sbjct 744141 TCCTTGCCGCCTTGCAGACGAGTTCCGAATTGACCGTTGGGGGAGAGCAAGTTGATGTTG 744082 Query 152116 TTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCTTCACCG 152175 ||| ||| || || || || |||| |||||||| | |||||| | | |||||| Sbjct 744081 TTGCTGCCAACAAAGTTTTGCGCCAGGCCGACAATCGTACTCTGCAGGGACACCTCACCG 744022 Query 152176 TGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAACTGCGCCACCTTCATGTCCGTC 152235 ||||| ||| | || || |||| | ||| || || | ||| || ||||| || ||| || Sbjct 744021 TGGTGGTACCCAGTGTGTTCCGATACGTAACCAGCGAGCTGTGCAACCTTGATCTCCTTC 743962 Query 152236 GTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTGGGATGGTTTCAAACCGTCC 152295 | || || ||||| || | | || |||||||||||| || || | |||||| Sbjct 743961 TTGAGATTGCGCTTGAAGCAACCAAACATGACCTTGCGCTGGCCAGGCTTGAGACCGTCG 743902 Query 152296 ACCACGTGA-GGAATCGAACGCTTGATGTC 152324 | || ||| ||||| || ||| || |||| Sbjct 743901 GCAAC-TGACGGAATGGAGCGCATGTTGTC 743873 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215760593000