Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20guehoae_20[genbank_20GCA_5F001600415.1_202016- 03-01] 35 sequences; 33,698,914 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq18 109 5e-19 seq3 98.7 9e-16 >seq18 Length=639095 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || || ||||||||| | || || ||||| || || | ||| Sbjct 12486 ATGCAGATCTTCGTCAAGACCCTTACCGGCAAGACCATCACCCTTGAGGTCGAGTCTTCC 12545 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| || | || || || || || ||||| || ||||| || ||||| || Sbjct 12546 GACACGATCGACAACGTGAAGAGCAAGATCCAGGACAAGGAGGGCATTCCTCCCGACCAG 12605 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||| || || || | || ||| | || | || ||||||||| Sbjct 12606 CAGCGTCTCATTTTCGCGGGAAAGCAGCTCGAGGACGGCCGCACATTGTCTGATTACAAC 12665 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||||||||| | || | ||| | || |||| ||||| || Sbjct 12666 ATCCAGAAGGAGTCGACGCTTCACCTCGTTCTCCGCCTGCGTGGTGGTAT 12715 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 27003 AAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATG 27062 || || || || || ||| | || || || || || || |||| ||| ||||||| | Sbjct 12924 AAGACGCTCACGGGAAAGACGATCACCCTCGAGGTCGAGTCGTCGGACACGATTGACAAC 12983 Query 27063 GTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATAC 27122 ||||| || || || ||||| || || || || || || || |||||| | || | | Sbjct 12984 GTCAAGTCGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAGCAGCGTCTCATCTTC 13043 Query 27123 GCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCG 27182 |||||||| || | || ||| | ||| | ||||| |||||||| || ||||||||| Sbjct 13044 GCCGGCAAGCAGCTCGAGGACGGCCGCACCCTGTCCGACTACAACATCCAGAAGGAGTCG 13103 Query 27183 ACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || | || | || | || |||| ||||| || Sbjct 13104 ACGCTCCACCTCGTCCTTCGCCTGCGTGGTGGTAT 13138 Score = 86.0 bits (94), Expect = 5e-12 Identities = 113/157 (72%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 27009 CTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAA 27068 |||||||||||| | || |||||||| || || | || ||| | || || | ||||| Sbjct 12229 CTGACCGGCAAGACCATCACTCTTGAGGTCGAGTCCTCGGACACCATCGACAACGTCAAG 12288 Query 27069 CAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGC 27128 || ||||| ||||| || ||||| || ||||| || ||||| | || | ||||||| Sbjct 12289 TCGAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAGCAGCGCCTCATCTTCGCCGGC 12348 Query 27129 AAACAATTGGAAGACAGTTCGACCGTTTCCGATTACA 27165 || || | || ||| || ||| |||| || |||| Sbjct 12349 AAGCAGCTCGAGGACGGTCGCACCCTTTCGGACTACA 12385 >seq3 Length=2791342 Score = 98.7 bits (108), Expect = 9e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 27009 CTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAA 27068 || || |||||| | || || ||||| ||||| | || ||| | || || | ||||| Sbjct 1929754 CTCACGGGCAAGACCATCACCCTTGAGGTGGAGTCTTCGGACACCATCGACAACGTCAAG 1929813 Query 27069 CAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGC 27128 || || || ||||| || ||||| || ||||| || ||||| | || | ||||||| Sbjct 1929814 TCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAGCGCCTCATCTTCGCCGGC 1929873 Query 27129 AAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTA 27188 || || | || ||| | ||| |||| || |||||||| || |||||||||||| | Sbjct 1929874 AAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAACATCCAGAAGGAGTCGACCCTT 1929933 Query 27189 CATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || | || | || | || |||||||| Sbjct 1929934 CACCTTGTCCTCCGCCTTCGTGGTGGCAT 1929962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434918209723200