Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20guehoae_20[genbank_20GCA_5F001600415.1_202016- 03-01] 35 sequences; 33,698,914 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq3 174 4e-38 seq18 158 3e-33 seq1 122 2e-22 >seq3 Length=2791342 Score = 174 bits (192), Expect = 4e-38 Identities = 159/201 (79%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | |||||||||||||| || ||||| || |||||||| || |||| |||||| Sbjct 1929954 ACGAAGGCGGAGGACAAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGT 1929895 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | || || || ||||||||||| |||||||| ||||| || ||||| || || | || Sbjct 1929894 GCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGGGGGATGCC 1929835 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||||||||||||||| || ||||| ||||||||||| || || ||||| || Sbjct 1929834 CTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCCGAAGACTCCACCTCAAG 1929775 Query 211073 AGTGATCGTCTTTCCCGTGAG 211093 ||||| ||||| |||||||| Sbjct 1929774 GGTGATGGTCTTGCCCGTGAG 1929754 >seq18 Length=639095 Score = 158 bits (174), Expect = 3e-33 Identities = 153/197 (78%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || || ||||| || |||||||| || || | ||||| | || || Sbjct 13120 AGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCC 13061 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| || || || ||||| || || | || ||||||||| Sbjct 13060 TCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCC 13001 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| || || ||||| || || |||||||| ||||||||| Sbjct 13000 TGGATCTTCGACTTGACGTTGTCAATCGTGTCCGACGACTCGACCTCGAGGGTGATCGTC 12941 Query 211083 TTTCCCGTGAGAGTCTT 211099 ||||||||||| ||||| Sbjct 12940 TTTCCCGTGAGCGTCTT 12924 Score = 149 bits (164), Expect = 1e-30 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || |||||||| || ||||| || |||||||| ||||| | | || | || || Sbjct 12697 AGAACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAATCAGACAATGTGCGGCCGTCC 12638 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||| || ||||| || || || || ||||| ||||||| || ||||||||| Sbjct 12637 TCGAGCTGCTTTCCCGCGAAAATGAGACGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCC 12578 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| |||||||| ||||| ||||| || || ||||| || ||||| ||| Sbjct 12577 TGGATCTTGCTCTTCACGTTGTCGATCGTGTCGGAAGACTCGACCTCAAGGGTGATGGTC 12518 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || ||||| || || | |||||| Sbjct 12517 TTGCCGGTAAGGGTCTTGACGAAGATCTGCAT 12486 Score = 138 bits (152), Expect = 3e-27 Identities = 124/156 (79%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 210939 TAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGG 210998 || |||| |||||| | || || || ||||||||||| |||||||||||||| || ||| Sbjct 12061 TAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGG 12002 Query 210999 TCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAG 211058 || || |||| || ||||||||||||||||| || ||||| ||||||||||| ||| Sbjct 12001 TCGGGGGGAATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCCGAG 11942 Query 211059 CTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGA 211094 || ||||| || ||||| ||||| || |||||| Sbjct 11941 GACTCGACCTCAAGGGTGATGGTCTTGCCAGTGAGA 11906 Score = 127 bits (140), Expect = 5e-24 Identities = 121/155 (78%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 210939 TAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGG 210998 || |||| |||||| | || || || ||||||||||| |||||||| ||||| || ||| Sbjct 12383 TAGTCCGAAAGGGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGG 12324 Query 210999 TCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAG 211058 || || |||| || ||||||||||| ||||| || ||||| ||||||||||| ||| Sbjct 12323 TCGGGGGGAATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCGATGGTGTCCGAG 12264 Query 211059 CTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAG 211093 || ||||| |||||||| ||||| || || || Sbjct 12263 GACTCGACCTCAAGAGTGATGGTCTTGCCGGTCAG 12229 Score = 93.3 bits (102), Expect = 1e-13 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 || ||||||||||||||||| || ||||| || || ||||| || || |||||| Sbjct 12817 CCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCAATCGTGTCCGACGACTCGACCTCG 12758 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || |||||||||||||||||||| ||||| || || | |||||| Sbjct 12757 AGGGTGATCGTCTTTCCCGTGAGCGTCTTGACGAAGATCTGCAT 12714 >seq1 Length=3969531 Score = 122 bits (134), Expect = 2e-22 Identities = 120/155 (77%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 210939 TAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGG 210998 || |||| |||||| | || || || ||||||||||| |||||||| || || || ||| Sbjct 1130109 TAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGG 1130168 Query 210999 TCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAG 211058 || || || | || ||||||||||||||||| || ||||| || || ||||| ||| Sbjct 1130169 TCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATCGTGTCCGAG 1130228 Query 211059 CTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAG 211093 || |||||||| ||||| ||||| |||||||| Sbjct 1130229 GACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAG 1130263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159151480192775