Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20guehoae_20[genbank_20GCA_5F001600415.1_202016- 03-01] 35 sequences; 33,698,914 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq3 127 5e-24 seq18 118 3e-21 seq1 93.3 1e-13 >seq3 Length=2791342 Score = 127 bits (140), Expect = 5e-24 Identities = 147/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | ||||||||||| || || || || || |||| ||||| || | | || Sbjct 1929954 ACGAAGGCGGAGGACAAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGT 1929895 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || || || |||||||| || |||||||| || || || |||||||| || || || Sbjct 1929894 GCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGGGGGATGCC 1929835 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| |||||||| ||| || ||||||||||| || | ||||| || | Sbjct 1929834 CTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCCGAAGACTCCACCTCAAG 1929775 Query 225672 CGTGATCGTCTTGCCCGT 225689 ||||| ||||||||||| Sbjct 1929774 GGTGATGGTCTTGCCCGT 1929757 >seq18 Length=639095 Score = 118 bits (130), Expect = 3e-21 Identities = 139/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| |||||||| || || || || |||| ||||| |||| || || | || || Sbjct 13120 AGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCC 13061 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| || || || ||||| || || ||||| |||||||| Sbjct 13060 TCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCC 13001 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || || || ||||| || | || || || | ||||||||| Sbjct 13000 TGGATCTTCGACTTGACGTTGTCAATCGTGTCCGACGACTCGACCTCGAGGGTGATCGTC 12941 Query 225682 TTGCCCGT 225689 || ||||| Sbjct 12940 TTTCCCGT 12933 Score = 107 bits (118), Expect = 5e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 || || || |||||||| || ||||||||||| || || |||||||| ||||| || ||| Sbjct 12043 CCGTCCTCGAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCGGGGGGAATGCCCTCC 11984 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 ||||| |||||||| ||| || ||||||||||| |||| || || || | ||| Sbjct 11983 TTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTCAAGGGTG 11924 Query 225676 ATCGTCTTGCCCGT 225689 || |||||||| || Sbjct 11923 ATGGTCTTGCCAGT 11910 Score = 102 bits (112), Expect = 2e-16 Identities = 104/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 || || || |||||||| || |||||||| || || || |||||||| ||||| || ||| Sbjct 12365 CCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGGGGAATGCCCTCC 12306 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 ||||| || ||||| ||| || ||||||||||| |||| || || || | ||| Sbjct 12305 TTGTCCTGAATCTTCGACTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTCAAGAGTG 12246 Query 225676 ATCGTCTTGCCCGTCA 225691 || |||||||| |||| Sbjct 12245 ATGGTCTTGCCGGTCA 12230 >seq1 Length=3969531 Score = 93.3 bits (102), Expect = 1e-13 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 || || || |||||||| || |||||||| || || || |||||||| || || || ||| Sbjct 1130127 CCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCC 1130186 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 ||||| |||||||| ||| || || || ||||| |||| || || || | ||| Sbjct 1130187 TTGTCCTGGATCTTGGACTTGACGTTGTCAATCGTGTCCGAGGACTCGACCTCGAGGGTG 1130246 Query 225676 ATCGTCTTGCCCGT 225689 || ||||||||||| Sbjct 1130247 ATGGTCTTGCCCGT 1130260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192530665224290