Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20guehoae_20[genbank_20GCA_5F001600415.1_202016- 03-01] 35 sequences; 33,698,914 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq18 168 1e-36 seq3 141 2e-28 seq4 132 1e-25 seq1 120 6e-22 seq19 89.7 1e-12 >seq18 Length=639095 Score = 168 bits (186), Expect = 1e-36 Identities = 165/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||||||||| || || || | ||| || || |||||||||||||| | Sbjct 13136 ACCACCACGCAGGCGAAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGA 13077 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||| ||||| || || || ||||| ||||| | ||| || ||||| || Sbjct 13076 CAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGG 13017 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||||||||||| |||||||| | || ||| | || || |||||||| | ||||| Sbjct 13016 GATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCAATCGTGTCCGACGACTCGAC 12957 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTT 283084 ||||| ||||||||||| ||||| | ||||| Sbjct 12956 CTCGAGGGTGATCGTCTTTCCCGTGAGCGTCTT 12924 Score = 158 bits (174), Expect = 3e-33 Identities = 174/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||||||| || || || || | ||| || || ||||||||||| |||| Sbjct 12713 ACCACCACGCAGGCGGAGAACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAATCAGA 12654 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | |||||||| ||||| || || || || || || || | ||| || ||||| || Sbjct 12653 CAATGTGCGGCCGTCCTCGAGCTGCTTTCCCGCGAAAATGAGACGCTGCTGGTCGGGAGG 12594 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 ||| ||||||||||| |||||| ||||| || ||| | ||||| ||||| |||| |||| Sbjct 12593 AATGCCCTCCTTGTCCTGGATC-TTGCTCTTCACGTTGTCGATCGTGTCGGAAGACTCGA 12535 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 | || || ||||| ||||| || || | ||||| ||||| |||||||| Sbjct 12534 CCTCAAGGGTGATGGTCTTGCCGGTAAGGGTCTTGACGAAGATCTGCAT 12486 Score = 116 bits (128), Expect = 8e-21 Identities = 118/154 (77%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 282922 TGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTT 282981 ||||||| | ||| |||||||| ||||| || || || ||||| ||||| | || || | Sbjct 12063 TGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATAAGGCGCTGCT 12004 Query 282982 GGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCG 283041 |||| ||||| ||||||||||| |||||||| | || ||| | ||||| ||||||| Sbjct 12003 GGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCCG 11944 Query 283042 AAGCTTCGACTTCGAGAGTGATCGTCTTACCCGT 283075 | | ||||| || || ||||| ||||| || || Sbjct 11943 AGGACTCGACCTCAAGGGTGATGGTCTTGCCAGT 11910 Score = 114 bits (126), Expect = 3e-20 Identities = 119/156 (76%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 282922 TGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTT 282981 ||||||| | ||| ||||| || ||||| || || || ||||| ||||| | || || | Sbjct 12385 TGTAGTCCGAAAGGGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCT 12326 Query 282982 GGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCG 283041 |||| ||||| ||||||||||| || ||||| | || ||| | ||||| ||||||| Sbjct 12325 GGTCGGGGGGAATGCCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCGATGGTGTCCG 12266 Query 283042 AAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCA 283077 | | ||||| || |||||||| ||||| || |||| Sbjct 12265 AGGACTCGACCTCAAGAGTGATGGTCTTGCCGGTCA 12230 Score = 104 bits (114), Expect = 5e-17 Identities = 89/110 (81%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 282990 GGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCG 283049 || |||||||||||||| |||||||| | || ||| | || || |||||||| | ||| Sbjct 12823 GGGATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCAATCGTGTCCGACGACTCG 12764 Query 283050 ACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || ||||| ||||||||||| ||||| | ||||| ||||| |||||||| Sbjct 12763 ACCTCGAGGGTGATCGTCTTTCCCGTGAGCGTCTTGACGAAGATCTGCAT 12714 >seq3 Length=2791342 Score = 141 bits (156), Expect = 2e-28 Identities = 153/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| ||||| || || || || | || || || |||||||||||||| | | Sbjct 1929959 CCACCACGAAGGCGGAGGACAAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 1929900 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || |||||||| ||||| || || || ||||| ||||| | || || ||||| || Sbjct 1929899 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGGGGG 1929840 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| |||||||| | || ||| | ||||| |||||||||| || || Sbjct 1929839 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCCGAAGACTCCACC 1929780 Query 283053 TCGAGAGTGATCGTCTTACCCGT 283075 || || ||||| ||||| ||||| Sbjct 1929779 TCAAGGGTGATGGTCTTGCCCGT 1929757 >seq4 Length=2444010 Score = 132 bits (146), Expect = 1e-25 Identities = 297/443 (67%), Gaps = 10/443 (2%) Strand=Plus/Minus Query 273623 CCAACCGGTGCCAATACCGGAAGAACCATTCACCAGAATACTCGGGATAATTGGGACATA 273682 |||||| || |||||||| | ||| || | || | | ||| | |||||| ||| Sbjct 744325 CCAACCCGTACCAATACCATCGGCACCGTTGATGAGGACAAGCGGCACGGTTGGGAGATA 744266 Query 273683 ATATTCGGGCTCAATTTTATCACCATCGTCGTAAAGGTACTTCAACAAAGCATCATCCGT 273742 || |||||||| || || | ||||| ||| || || |||||| || || |||| Sbjct 744265 GTACTCGGGCTCGATCTTTTGCCCATCTTCGGTGAGATAGGTCAACAGCGCGTCGTCCGC 744206 Query 273743 ATCAACGAAAACCTTTCGCGTCT---GAGGATTCAGTTTCGTGAAAATGTACCTGGCACT 273799 | | ||||| | |||||| |||| | | |||||||| || | ||| || Sbjct 744205 AGGATGGAAAAGTGTACGCGTCATGCGAGGGATGGCT---GTGAAAATATAACGGGCGCT 744149 Query 273800 CGCATGGTCCTTGCCACCTTGCAGCCTCGAACCAAACTGACCCTCGGGCAGTAGCCAGTT 273859 |||| ||||||||| |||||||| | | || || ||||| | ||| ||| |||| Sbjct 744148 CGCAGCGTCCTTGCCGCCTTGCAGACGAGTTCCGAATTGACCGTTGGGGGAGAGCAAGTT 744089 Query 273860 TATGTTGTTGCTACCGACGTAATCCTGAGCCATATTCACGATAGTCCCCTGAAGGGATAC 273919 ||||||||||| || || | | || |||| || || || | ||| ||||| || Sbjct 744088 GATGTTGTTGCTGCCAACAAAGTTTTGCGCCAGGCCGACAATCGTACTCTGCAGGGACAC 744029 Query 273920 CTCGCCGTGGTGATAGGCGCTGTGTTCGGCGATA--TAACCACTGAACTGAGCAACCTTC 273977 ||| |||||||| || | ||||||| ||||| |||||| || ||| |||||||| Sbjct 744028 CTCACCGTGGTGGTACCCAGTGTGTTC--CGATACGTAACCAGCGAGCTGTGCAACCTTG 743971 Query 273978 ACATCGCTCGTCAAGTTTCGCTTGAATGCGGAATACAACACCTTCCGCTGCGAGGGCTTG 274037 | || || | | || |||||||| | ||| ||||| ||||| |||||| Sbjct 743970 ATCTCCTTCTTGAGATTGCGCTTGAAGCAACCAAACATGACCTTGCGCTGGCCAGGCTTG 743911 Query 274038 AACCCATCAACGACCGATGGAAT 274060 | || || | || || ||||| Sbjct 743910 AGACCGTCGGCAACTGACGGAAT 743888 >seq1 Length=3969531 Score = 120 bits (132), Expect = 6e-22 Identities = 119/154 (77%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 282922 TGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTT 282981 ||||||| | ||| |||||||| ||||| || || || ||||| ||||| | ||| || | Sbjct 1130107 TGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCT 1130166 Query 282982 GGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCG 283041 |||| || || ||||||||||| |||||||| | || ||| | || || ||||||| Sbjct 1130167 GGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATCGTGTCCG 1130226 Query 283042 AAGCTTCGACTTCGAGAGTGATCGTCTTACCCGT 283075 | | ||||| ||||| ||||| ||||| ||||| Sbjct 1130227 AGGACTCGACCTCGAGGGTGATGGTCTTGCCCGT 1130260 >seq19 Length=579500 Score = 89.7 bits (98), Expect = 1e-12 Identities = 210/312 (67%), Gaps = 9/312 (3%) Strand=Plus/Plus Query 316530 CGTCTCGGCGAGCGTGTAGTA--ACTTG-CAGATTCGGGACGCTTCTTCACGAATTCGGA 316586 |||| |||| ||||||||||| ||||| | || |||||| | || || || | ||| Sbjct 462631 CGTCGCGGCAAGCGTGTAGTACGACTTGGCCGA--CGGGACACG-CTCGACAAACTTGGA 462687 Query 316587 CAGATTTCCTTTATACTTCTTCAGCTTCAGGTTGGGTTCGTAATGGATGATAGAAGTACA 316646 ||| || || || || | |||||| ||| ||||| ||||| || || || Sbjct 462688 CAGGTTGCCCTTGTAGTATGCGAGCTTCTTGTTC---TCGTAGTGGATAATGTCCGTGCA 462744 Query 316647 GACAGCATCGAGGAAACCAGAATCGTGTGATACAATCACACATGAAACGCCTTTTAGGTT 316706 |||| || ||||| ||||| ||||| || ||||||| || | || | | ||||| Sbjct 462745 GACATTGTCAAGGAAGCCAGAGTCGTGCGAGACAATCAGGCAGGTAATGTCGGGGAGGTT 462804 Query 316707 GACCAGATAGTCGATCAGCCAGCTCACATTCGACACAGAAAGATGGTTGGTCGGTTCGTC 316766 ||| || |||| ||||| ||| || || || ||||||||||||||||| Sbjct 462805 GACGAGGTAGTTTTCGAGCCAAGCAACAGTCTGGACGTCGAGGTGGTTGGTCGGTTCGTC 462864 Query 316767 AAGTAGTAGTAGCTTCGCGTCCAACAGCATAGCGCGTGCGAGAGCAAGCTTCATTTTCCA 316826 || || || | | || | | ||||| || || || || | |||||||| ||||| Sbjct 462865 GAGGAGCAGAATGTCGGCACCGATAAGCATGGCACGCGCAAGCTCGAGCTTCATCTTCCA 462924 Query 316827 CCCCCCGGAAAG 316838 || || || || Sbjct 462925 ACCACCCGAGAG 462936 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046738730602890