Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20guehoae_20[genbank_20GCA_5F001600415.1_202016- 03-01] 35 sequences; 33,698,914 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq18 125 5e-24 seq3 98.7 7e-16 >seq18 Length=639095 Score = 125 bits (138), Expect = 5e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||||||||| |||||| |||||||||||||| | | | ||| |||| || Sbjct 12694 ACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAATCAGACAATGTGCGGCCGTCCTCG 12635 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || || || || | ||||||||| || | ||| | || ||||| ||| Sbjct 12634 AGCTGCTTTCCCGCGAAAATGAGACGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCCTGG 12575 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||||| | | || ||||||| || || ||||| | || || ||||| Sbjct 12574 ATCTTGCTCTTCACGTTGTCGATCGTGTCGGAAGACTCGACCTCAAGGGTGATGGTCTTG 12515 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || |||||||| |||||||| ||||| Sbjct 12514 CCGGTAAGGGTCTTGACGAAGATCTGCAT 12486 Score = 120 bits (132), Expect = 2e-22 Identities = 143/194 (74%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| ||||| |||||| ||||||||||| |||| || ||| |||| || Sbjct 13117 ACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCCTCG 13058 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||| ||||| | ||||||||| || | || | ||| ||||| ||| Sbjct 13057 AGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGG 12998 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 |||||| ||| | | | || ||||| | || || ||||| | || ||||||||| Sbjct 12997 ATCTTCGACTTGACGTTGTCAATCGTGTCCGACGACTCGACCTCGAGGGTGATCGTCTTT 12938 Query 44309 CCCGTGAGGGTCTT 44322 |||||||| ||||| Sbjct 12937 CCCGTGAGCGTCTT 12924 >seq3 Length=2791342 Score = 98.7 bits (108), Expect = 7e-16 Identities = 135/189 (71%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || |||||||| || |||||| ||||||||||| || | || ||| |||| || Sbjct 1929941 ACAAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCG 1929882 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||| ||||| | |||||||| || | || | || ||||| ||| Sbjct 1929881 AGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGG 1929822 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | |||||||| | || |||||||| | || || ||||| Sbjct 1929821 ATCTTGGACTTGACGTTGTCGATGGTGTCCGAAGACTCCACCTCAAGGGTGATGGTCTTG 1929762 Query 44309 CCCGTGAGG 44317 ||||||||| Sbjct 1929761 CCCGTGAGG 1929753 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359990246441595