Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20guehoae_20[genbank_20GCA_5F001600415.1_202016- 03-01] 35 sequences; 33,698,914 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq18 143 6e-29 seq3 141 2e-28 seq1 118 3e-21 >seq18 Length=639095 Score = 143 bits (158), Expect = 6e-29 Identities = 148/194 (76%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 177936 AAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAAC 177995 || || ||||| ||||| ||||||||||||||||| || || ||||| || || ||| Sbjct 12924 AAGACGCTCACGGGAAAGACGATCACCCTCGAGGTCGAGTCGTCGGACACGATTGACAAC 12983 Query 177996 GTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTC 178055 ||||| ||||| |||||||| || || ||||| ||||||||||| || || |||||| Sbjct 12984 GTCAAGTCGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAGCAGCGTCTCATCTTC 13043 Query 178056 GCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCA 178115 ||||| || |||||||| || || | || || |||| || ||| |||| || || || Sbjct 13044 GCCGGCAAGCAGCTCGAGGACGGCCGCACCCTGTCCGACTACAACATCCAGAAGGAGTCG 13103 Query 178116 ACACTGCATCTTGT 178129 || || || || || Sbjct 13104 ACGCTCCACCTCGT 13117 Score = 123 bits (136), Expect = 6e-23 Identities = 121/156 (78%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 177941 TCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAA 178000 |||||| || || || |||||||| ||||| || ||| ||||||||||| |||||||| Sbjct 11906 TCTCACTGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACCATCGACAACGTCAA 11965 Query 178001 ACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGG 178060 ||||| |||||||| || || || || || |||||||| || |||||||||||||| Sbjct 11966 GTCGAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAGCAGCGCCTTATCTTCGCCGG 12025 Query 178061 AAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTA 178096 || |||||||| || || | || ||| | || || Sbjct 12026 CAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTA 12061 Score = 113 bits (124), Expect = 1e-19 Identities = 118/155 (76%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 177942 CTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAA 178001 || || || || || ||||| || ||||| || ||| ||||||||||| |||||||| Sbjct 12229 CTGACCGGCAAGACCATCACTCTTGAGGTCGAGTCCTCGGACACCATCGACAACGTCAAG 12288 Query 178002 CAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGA 178061 |||||||||||||| || || || || || |||||||| || || ||||||||||| Sbjct 12289 TCGAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAGCAGCGCCTCATCTTCGCCGGC 12348 Query 178062 AAACAGCTCGAAGATGGAAGGACTCTTGCCGATTA 178096 || |||||||| || || | || ||| | || || Sbjct 12349 AAGCAGCTCGAGGACGGTCGCACCCTTTCGGACTA 12383 Score = 86.0 bits (94), Expect = 2e-11 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| ||||| ||||||||||||||||| || || ||| Sbjct 12717 CAGATCTTCGTCAAGACGCTCACGGGAAAGACGATCACCCTCGAGGTCGAGTCGTCGGAC 12776 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCC 178030 || || || |||||||| ||||| |||||||| || || ||||| Sbjct 12777 ACGATTGACAACGTCAAGTCGAAGATCCAGGACAAGGAGGGTATCCC 12823 >seq3 Length=2791342 Score = 141 bits (156), Expect = 2e-28 Identities = 144/188 (77%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 177942 CTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAA 178001 ||||| || || || |||||||| |||||||| || ||||||||||| |||||||| Sbjct 1929754 CTCACGGGCAAGACCATCACCCTTGAGGTGGAGTCTTCGGACACCATCGACAACGTCAAG 1929813 Query 178002 CAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGA 178061 ||||| |||||||| || || ||||| || |||||||| || || ||||||||||| Sbjct 1929814 TCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAGCGCCTCATCTTCGCCGGC 1929873 Query 178062 AAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTG 178121 || |||||||| || || | || ||| | || || ||| |||| || || || || || Sbjct 1929874 AAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAACATCCAGAAGGAGTCGACCCTT 1929933 Query 178122 CATCTTGT 178129 || ||||| Sbjct 1929934 CACCTTGT 1929941 >seq1 Length=3969531 Score = 118 bits (130), Expect = 3e-21 Identities = 119/155 (77%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 177942 CTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAA 178001 ||||| || || || |||||||||||||| || ||| ||||| || || |||||||| Sbjct 1130263 CTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACGATTGACAACGTCAAG 1130204 Query 178002 CAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGA 178061 ||||| |||||||| || || ||||| || |||||||| || || ||||||||||| Sbjct 1130203 TCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAGCGTCTCATCTTCGCCGGC 1130144 Query 178062 AAACAGCTCGAAGATGGAAGGACTCTTGCCGATTA 178096 || |||||||| || || | || ||| | || || Sbjct 1130143 AAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTA 1130109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203730660201790