Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20guehoae_20[genbank_20GCA_5F001600415.1_202016- 03-01] 35 sequences; 33,698,914 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq18 138 1e-27 seq3 120 3e-22 seq1 89.7 5e-13 >seq18 Length=639095 Score = 138 bits (152), Expect = 1e-27 Identities = 160/213 (75%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | || || || ||||| ||||||||| ||||| |||||||| Sbjct 13135 CCACCACGCAGGCGAAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAC 13076 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| |||| |||||||||||||||||||| || || ||||| ||||||| ||| Sbjct 13075 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGG 13016 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||||| ||| || ||| ||| | | | ||||| |||||| || Sbjct 13015 ATACCCTCCTTGTCCTGGATCTTCGACTT-GACGTTGTCAATCGTGTCCGACGACTCGAC 12957 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTT 41847 ||| | || ||||| || ||||| |||||||| Sbjct 12956 CTCGAGGGTGATCGTCTTTCCCGTGAGCGTCTT 12924 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | || || || ||||| ||||||||| ||||| || || || Sbjct 12712 CCACCACGCAGGCGGAGAACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAATCAGAC 12653 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | ||||| |||| ||||||||||| || ||||| || || ||||| ||||| | ||| Sbjct 12652 AATGTGCGGCCGTCCTCGAGCTGCTTTCCCGCGAAAATGAGACGCTGCTGGTCGGGAGGA 12593 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| || |||| ||| | | | |||||| ||||| || Sbjct 12592 ATGCCCTCCTTGTCCTGGATCTTGCTCTTC-ACGTTGTCGATCGTGTCGGAAGACTCGAC 12534 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| | || || || || || || || ||||| ||||| |||||||| Sbjct 12533 CTCAAGGGTGATGGTCTTGCCGGTAAGGGTCTTGACGAAGATCTGCAT 12486 Score = 98.7 bits (108), Expect = 9e-16 Identities = 77/92 (84%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 41687 TAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGG 41746 ||||| || |||||||| |||| |||||||||||||||||||| || |||||||| ||| Sbjct 12061 TAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGG 12002 Query 41747 TCCGCGGGAACGCTCTCCTTGTCCATGATTTT 41778 || | ||||| || |||||||||| ||| || Sbjct 12001 TCGGGGGGAATGCCCTCCTTGTCCTGGATCTT 11970 Score = 98.7 bits (108), Expect = 9e-16 Identities = 117/156 (75%), Gaps = 2/156 (1%) Strand=Plus/Minus Query 41687 TAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGG 41746 ||||| || |||||||| |||| |||||||||||||||||||| || |||||||| ||| Sbjct 12383 TAGTCCGAAAGGGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGG 12324 Query 41747 TCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCT 41805 || | ||||| || |||||||||| ||| | || | | ||| | | | ||||| Sbjct 12323 TCGGGGGGAATGCCCTCCTTGTCC-TGAATCTTCGACTTGACGTTGTCGATGGTGTCCGA 12265 Query 41806 CGACTCCACCTCCACCGTTATCGTTTTACCCGTCAG 41841 ||||| ||||| | || || || || || ||||| Sbjct 12264 GGACTCGACCTCAAGAGTGATGGTCTTGCCGGTCAG 12229 >seq3 Length=2791342 Score = 120 bits (132), Expect = 3e-22 Identities = 153/208 (74%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || || || | || || || || || ||||||||| ||||| ||||| || Sbjct 1929960 GCCACCACGAAGGCGGAGGACAAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGA 1929901 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 |||||||| |||| |||||||||||||||||||| || |||||||| ||||| | ||| Sbjct 1929900 AAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGGGG 1929841 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | || |||||||||| ||| || ||| ||| | | | ||||| ||||||| Sbjct 1929840 GATGCCCTCCTTGTCCTGGATCTTGGACTT-GACGTTGTCGATGGTGTCCGAAGACTCCA 1929782 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAG 41841 |||| | || || || || ||||| || Sbjct 1929781 CCTCAAGGGTGATGGTCTTGCCCGTGAG 1929754 >seq1 Length=3969531 Score = 89.7 bits (98), Expect = 5e-13 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 41687 TAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGG 41746 ||||| || |||||||| |||| |||||||||||||||||||| || || ||||| ||| Sbjct 1130109 TAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGG 1130168 Query 41747 TCCGCGGGAACGCTCTCCTTGTCCATGATTTT 41778 || | ||| | || |||||||||| ||| || Sbjct 1130169 TCGGGGGGGATGCCCTCCTTGTCCTGGATCTT 1130200 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303797742000