Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20oleaginosus_20[genbank_20GCA_5F001027345.1_202 015-06-12] 180 sequences; 19,835,558 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq55 100 6e-16 seq3 86.0 1e-11 >seq55 Length=129735 Score = 100 bits (110), Expect = 6e-16 Identities = 148/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 230395 GAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC-CTTATTGG 230453 || || || || | ||| |||||||| | || || |||| ||| | ||||| || Sbjct 78422 GAGGCCGTCGAGATCGAGCAGGAGTTCCTCACCGAGGCCCTTCCC-GTCTCGCTTATCGG 78480 Query 230454 CATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGC 230513 ||||||||| | || ||| | ||||||||||| ||||| ||||||||| | | || || Sbjct 78481 CATGAACGCCAAGCTCATGTGCCAGTACATCGAGTTCGTCGCCGACCGCCTGCTCGTCGC 78540 Query 230514 ACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTC 230573 || || || || | | ||||| | |||||||| | || |||||| | || || Sbjct 78541 CCTCGGCAACCCCAAGATCTGGAACTCGACCAACCCCTTCGACTTCATGGAGATGATCTC 78600 Query 230574 GCTTCAAGGGAAGACCAACTTCTTCGA 230600 ||| || || ||| ||||||||||||| Sbjct 78601 GCTCCAGGGCAAGGCCAACTTCTTCGA 78627 >seq3 Length=604691 Score = 86.0 bits (94), Expect = 1e-11 Identities = 115/159 (72%), Gaps = 1/159 (1%) Strand=Plus/Plus Query 230470 ATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAA 230529 ||| | || ||||| || ||||| || ||||| | | || || || || ||||| || Sbjct 403923 ATGTGCCAATACATGGAGTTCGTGGCGGACCGTCTGATCGTCGCCCTCGGCTACGACAAG 403982 Query 230530 GTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACC 230589 ||||| || | | |||||| || | | ||||||||||| || || || ||| || Sbjct 403983 ATGTACCACGCCACGAACCCATTCGACTGGATGGAGCTCATCAGCCTGCAGGGCAAGGCC 404042 Query 230590 AACTTCTTCGAAAAGCGTGTCAGTGACTATCAGA-GGCC 230627 ||||| ||||| ||||||||||| ||||||| |||| Sbjct 404043 AACTTTTTCGAGTCGCGTGTCAGTGCGTATCAGATGGCC 404081 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057821560393400