Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20oleaginosus_20[genbank_20GCA_5F001027345.1_202 015-06-12] 180 sequences; 19,835,558 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq119 109 5e-19 seq2 95.1 1e-14 >seq119 Length=35684 Score = 109 bits (120), Expect = 5e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||| | ||||| || |||||||| |||||||| ||||||| | Sbjct 727 CCGCCACGGAGACGGAGCACGAGGTGCAACGTCGACTCCTTCTGAATGTTGTAGTCCGAC 786 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | ||||||||||||| ||||| || ||||||| | ||||||||| || Sbjct 787 AGCGTACGCCCGTCCTCCAGCTGCTTGCCGGCGAAAATAAGGCGCTGCTGGTCGGGAGGG 846 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| |||||| || || | | | | || ||| || ||| Sbjct 847 ATGCCCTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCAATCGTGTCAGAGGACTCGACC 906 Query 21129 TCCACGGTAATGGTCTTGCCGGT 21151 || | |||||||||||||| || Sbjct 907 TCGAGCGTAATGGTCTTGCCAGT 929 Score = 89.7 bits (98), Expect = 4e-13 Identities = 124/174 (71%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 20978 AGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCC 21037 |||||||||||| |||||||| ||||| | || || | ||||||| ||||| ||||| Sbjct 1262 AGTGGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGCCCGTCCTCGAGCTGCTTGCC 1321 Query 21038 CGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTT 21097 || | ||||| | ||||||||| || | ||| |||||||| ||||| || Sbjct 1322 GGCGAAGATAAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGAATCTTGGACTT 1381 Query 21098 CACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGT 21151 || | | ||| ||| || || ||| || | ||| |||||||||||||| Sbjct 1382 GACGTTGTCGATAGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCGGT 1435 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 || |||||||| |||||||| ||||| | || || | ||||||| ||||| ||||| Sbjct 1035 GTAGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGCCCGTCCTCAAGCTGCTTGCCA 1094 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 ||| | || || | ||||||||| || | ||| |||||||| |||||| || Sbjct 1095 GCAAAGATGAGACGCTGCTGGTCAGGTGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTG 1154 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | ||| || || | ||| || | ||| || ||||||||||| | || Sbjct 1155 ACGTTGTCGATCGTGTCTGACGACTCGACCTCAAGGGTGATCGTCTTGCCGGTCAGAGTC 1214 Query 21159 TTGACAAATATTTGCAT 21175 ||||| || || ||||| Sbjct 1215 TTGACGAAGATCTGCAT 1231 >seq2 Length=620658 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 || |||||||| || ||||| ||||||| ||||| || ||||||| ||||| ||||| Sbjct 114279 GTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCA 114338 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || || | ||||||||| ||| | ||| |||||||| |||||| || Sbjct 114339 GCGAAGATGAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTCGACTTG 114398 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | ||| || || || ||| || | || ||||||||||| || | || Sbjct 114399 ACGTTGTCGATGGTGTCCGAGGACTCGACCTCGAGAGTGATGGTCTTGCCCGTGAGGGTC 114458 Query 21159 TTGACAAATATTTGCAT 21175 ||||| || || ||||| Sbjct 114459 TTGACGAAAATCTGCAT 114475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422258273668880