Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20oleaginosus_20[genbank_20GCA_5F001027345.1_202 015-06-12] 180 sequences; 19,835,558 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq55 376 3e-99 seq2 156 4e-33 seq119 136 4e-27 seq1 134 1e-26 seq3 132 5e-26 seq14 127 2e-24 >seq55 Length=129735 Score = 376 bits (416), Expect = 3e-99 Identities = 570/802 (71%), Gaps = 13/802 (2%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||| ||||||| |||||||||| ||||||| | |||| Sbjct 77804 ATCTGGCAGATGTACAAGAAGGCGCAGGCGTCCTTCTGGACCGCCGAGGAGATCAACCTC 77863 Query 116696 TCCAAGGACACGAGCGACTGGGAGCGCTTG---AACGACAACGAGCGCCATTTCATCAAG 116752 | ||| ||||||||| | | ||||||||||||||| | |||||| || Sbjct 77864 GCGCCCGACCTCCACGACTGGGACAACAAGCTCAACGACAACGAGCGCTACTTCATCGAG 77923 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 |||||||| ||||| |||||||| |||||||||||||||||||| || |||||||| Sbjct 77924 CACGTGCTCGCCTTCTTCGCCGCGTCAGACGGCATCGTCAACGAGAACCTTGTCGAGCGC 77983 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 ||| ||||| ||| | |||||||| | |||||||||||| |||||| ||| Sbjct 77984 TTCTGCGGTGAGGTCCAGATCGCCGAGGCCAAGACCTTCTACGGCTTCCAGATCATGATG 78043 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCG---CTCTTCG 116929 |||||| | ||||| || | || || ||||||||||| ||| | || | | | Sbjct 78044 GAGAACATCCACTCTGAGACCTACTCTCTTCTCATCGACACCTACATCCGTGACGGTGCC 78103 Query 116930 GAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCC 116989 | | | || | | | | || ||||| ||||| || || ||| |||| |||||||| Sbjct 78104 C-GCCGCAACTACCTCT--TCAAGGCCATTGAGACCATCCCCTGCATCAAGAAGAAGGCC 78160 Query 116990 GAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCC-TTCGGCGAGCGCCTGGTGGC 117048 || |||||||||||||||||| | | | || || || | |||| ||||||||| | || Sbjct 78161 GACTGGGCGCTGCGCTGGATCTCGGAC-GACAGCTCGTCGTTCGCCGAGCGCCTCATCGC 78219 Query 117049 CTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAA 117108 ||||| |||||||||||| ||||||| |||||| |||||| | || || |||||||| Sbjct 78220 GTTCGCTGCCGTCGAGGGCATCTTCTTCTCGGGCTCGTTCGCCTCGATCTTCTGGCTCAA 78279 Query 117109 GAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGG 117168 ||| |||||||| |||||||| || || ||| |||||||| || || | |||||||| Sbjct 78280 GAAGCGCGGCCTTATGCCCGGTCTTACCTTCTCGAACGAGCTTATTTCGCGCGACGAGGG 78339 Query 117169 TCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGGC 117228 || || |||||| || || | || |||| || | | || || | ||| Sbjct 78340 CCTCCACACCGACTTCGCATGCCTCCTCTTCACCCACCTCCGCCGCCGCCCCCACCCGGA 78399 Query 117229 GCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGC 117288 | | | ||||| || ||| || |||| ||||||||| ||||||||||| || Sbjct 78400 CCTTATTGAGAAGATCATCCGCGAGGCCGTCGAGATCGAGCAGGAGTTCCTCACCGAGGC 78459 Query 117289 GCTGCCGGTGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACATCGAGTTCG 117347 || || || || | || | || || || | |||| || ||||||||||||| Sbjct 78460 CCTTCCCGTCTCGCTTATCGGCATGAA-CGCCAAGCTCATGTGCCAGTACATCGAGTTCG 78518 Query 117348 TCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAACCCGC 117407 |||||||| | ||||| ||| || | | | ||||| || ||| || ||||||| Sbjct 78519 TCGCCGACCGCCTGCTCGTCGCCCTCGGCAACCCCAAGATCTGGAACTCGACCAACCCCT 78578 Query 117408 TGGACTTTATGAACCTCATCTC 117429 | ||||| ||| | | ||||| Sbjct 78579 TCGACTTCATGGAGATGATCTC 78600 >seq2 Length=620658 Score = 156 bits (172), Expect = 4e-33 Identities = 162/210 (77%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||||||||| |||||||| |||| ||||| || | Sbjct 114475 ATGCAGATTTTCGTCAAGACCCTCACGGGCAAGACCATCACTCTCGAGGTCGAGTCCTCG 114416 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| ||||| || || | ||||| |||||||||||| | ||||| Sbjct 114415 GACACCATCGACAACG-TCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCA 114357 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| ||||| ||||| || |||| |||||||| |||||||| Sbjct 114356 GCAGCGCCTCATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAA 114297 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||| | || || || || || Sbjct 114296 CATCCAGAAGGAGTCGACCCTCCACCTCGT 114267 >seq119 Length=35684 Score = 136 bits (150), Expect = 4e-27 Identities = 145/189 (77%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 40711 CTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAA 40769 ||||| ||||| ||||||||| | || ||||| || | |||| | | |||| |||| Sbjct 1438 CTCACCGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACTATCGACAACG-TCAA 1380 Query 40770 GGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGG 40829 | || |||| ||||| ||||||||||| | |||||||| || || |||| ||| || Sbjct 1379 GTCCAAGATTCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGTCTTATCTTCGCCGG 1320 Query 40830 CAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCT 40889 ||| ||||| || |||| |||||| ||| |||||||||||| ||||||||| |||| || Sbjct 1319 CAAGCAGCTCGAGGACGGGCGCACTCTCTCCGACTACAACATTCAGAAGGAGTCCACTCT 1260 Query 40890 GCATCTAGT 40898 || || || Sbjct 1259 CCACCTTGT 1251 Score = 127 bits (140), Expect = 2e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || ||||| || |||||| | || ||||| | | Sbjct 1231 ATGCAGATCTTCGTCAAGACTCTGACCGGCAAGACGATCACCCTTGAGGTCGAGTCGTCA 1172 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| ||||| || || | ||||| |||||||| || | ||||| Sbjct 1171 GACACGATCGACAACG-TCAAGAGCAAGATCCAGGACAAGGAGGGCATTCCACCTGACCA 1113 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| || ||||| ||||| || |||| |||||| ||| ||||||||| Sbjct 1112 GCAGCGTCTCATCTTTGCTGGCAAGCAGCTTGAGGACGGGCGCACTCTCTCCGACTACAA 1053 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||| ||||||||| | || || || || || |||| | | |||||| Sbjct 1052 CATTCAGAAGGAGTCTACCCTCCACCTCGTTCTGCGTCTCCGCGGCGGC 1004 Score = 114 bits (126), Expect = 1e-20 Identities = 141/190 (74%), Gaps = 2/190 (1%) Strand=Plus/Minus Query 40711 CTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACA-GCGTGCAAACGCTCAA 40769 || || ||||| ||||| || |||| ||||| || | |||| | || |||| |||| Sbjct 932 CTGACTGGCAAGACCATTACGCTCGAGGTCGAGTCCTCTGACACGATTGACAACG-TCAA 874 Query 40770 GGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGG 40829 | || || | ||||| ||||||||||| | |||||||| || || || | ||| || Sbjct 873 GAGCAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGCCTTATTTTCGCCGG 814 Query 40830 CAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCT 40889 ||| |||||||| |||| ||| || || ||||||||||| ||||||||| | ||| | Sbjct 813 CAAGCAGCTGGAGGACGGGCGTACGCTGTCGGACTACAACATTCAGAAGGAGTCGACGTT 754 Query 40890 GCATCTAGTG 40899 ||| || ||| Sbjct 753 GCACCTCGTG 744 >seq1 Length=646641 Score = 134 bits (148), Expect = 1e-26 Identities = 185/258 (72%), Gaps = 3/258 (1%) Strand=Plus/Plus Query 139378 GCACGGCTTCCACGTGCACGAGTTCGGCGACGCGAGCAACGGGTGCACGTCGGCCGGCGA 139437 ||||||||||||||||||||||||||||||| ||| ||||||||| ||| | |||| Sbjct 136461 GCACGGCTTCCACGTGCACGAGTTCGGCGACCTCAGCGACGGGTGCATGTCCACAGGCGC 136520 Query 139438 GCACTTCAACCCCGCGCGCCGGGACCACGGCGCGCCCGACGCCGAGATCAGGCACGTCGG 139497 ||||| |||||| | | || |||||||| || || | ||| | ||||||| || Sbjct 136521 GCACTACAACCCTTTCGGACACGATCACGGCGCCCCGTCCGACAAGAACCGGCACGTGGG 136580 Query 139498 CGACCTGGGCAACCTCGAGTCGGCGGGCCGCGACGCGCTCACCGAGGTGAGCCTGACGGA 139557 ||||| || ||| || | ||||| | |||| || || || | | | ||| Sbjct 136581 TGACCTCGGTAACATCAA---GGCGGACGCGGACGGCGTCGCCAAGATCGAAATCAAGGA 136637 Query 139558 CGGCGTCGTGTCCCTGTACGGTCCGCACAGCATCATCGGACGGAGTCTGGTCGTGCACAC 139617 | || ||||| ||||| ||| | ||||||| | || || || || | ||||||||| Sbjct 136638 CTGCCTCGTGCGCCTGTGCGGGCAGCACAGCGTAATTGGGCGTGGTGTCGTCGTGCACGA 136697 Query 139618 GGACAGGGACGATCTGGG 139635 || || |||||| ||||| Sbjct 136698 GGGCACGGACGACCTGGG 136715 Score = 95.1 bits (104), Expect = 1e-14 Identities = 108/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 139372 CGGCCTGCACGGCTTCCACGTGCACGAGTTCGGCGACGCGAGCAACGGGTGCACGTCGGC 139431 ||||||||||||| | ||||| ||| ||||||||||| |||| | || |||| ||| | Sbjct 190104 CGGCCTGCACGGCATGCACGTACACCAGTTCGGCGACCTGAGCCAGGGATGCAACTCGAC 190163 Query 139432 CGGCGAGCACTTCAACCCCGCGCGCCGGGACCACGGCGCGCCCGACGCCGAGATCAGGCA 139491 || | ||||| ||||| | |||| |||||||||| ||||| | | | | | || Sbjct 190164 GGGGGTGCACTGGAACCCGCTGAACCGGAACCACGGCGCACCCGAAGACCGCAACCGTCA 190223 Query 139492 CGTCGGCGACCTGGGCAACCTCGAG 139516 | | |||||| |||||||| | ||| Sbjct 190224 CATGGGCGACATGGGCAACTTTGAG 190248 >seq3 Length=604691 Score = 132 bits (146), Expect = 5e-26 Identities = 167/227 (74%), Gaps = 3/227 (1%) Strand=Plus/Plus Query 116969 CCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCC 117028 || ||| || | |||||||||| |||||||| | ||| | | | |||| |||| Sbjct 403534 CCCTGCATCCGAAAGAAGGCCGACTGGGCGCTCAAGTATATCAC-GCCTGAGATGCCG-- 403590 Query 117029 TTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTC 117088 ||| || |||||| | || || || || |||||| ||||||| || || || Sbjct 403591 TTCCGCACGCGCCTCATCGCATTTGCTTGTGTGGAGGGCATCTTCTTCTCTGGGTCATTT 403650 Query 117089 GCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAG 117148 || || || || ||||||||||| ||||| || |||| ||||||||| |||||||||||| Sbjct 403651 GCAGCAATCTTCTGGCTCAAGAAGCGCGGGCTGATGCGCGGCCTGACCTTCAGCAACGAG 403710 Query 117149 CTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCT 117195 |||||||| | || ||||| |||| ||||||||| ||| |||| Sbjct 403711 CTCATCTCGCGTGATGAGGGCATGCACACCGACTTTGCATGTCTGCT 403757 >seq14 Length=296601 Score = 127 bits (140), Expect = 2e-24 Identities = 137/179 (77%), Gaps = 2/179 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || |||||||| ||||||||| |||| ||||| || || Sbjct 201690 ATGCAGATCTTCGTCAAGACTCTGACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCC 201631 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| ||||| || || | ||||| |||||||||||| | ||||| Sbjct 201630 GACACGATCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCA 201572 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 ||| || ||||||| ||| ||||| ||||| || |||| |||||||| ||||||| Sbjct 201571 GCAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACA 201513 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515218040756800