Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20oleaginosus_20[genbank_20GCA_5F001027345.1_202 015-06-12] 180 sequences; 19,835,558 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq119 145 7e-30 seq2 129 5e-25 seq14 118 9e-22 >seq119 Length=35684 Score = 145 bits (160), Expect = 7e-30 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 || ||||| | | || || | ||||| |||||||| || ||||||||||| ||| Sbjct 1005 CCGCCGCGGAGACGCAGAACGAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGAG 1064 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | ||||||| ||||| ||||| || ||||| |||||||||||||||| || || || Sbjct 1065 AGAGTGCGCCCGTCCTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCAGGTGGA 1124 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691 |||||||||||||| || || || || | |||| ||||| | ||||||| Sbjct 1125 ATGCCCTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATCGTGTCTGACGACTCGACC 1184 Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 || | ||| | ||| |||||||||||||| || || || ||||||||| Sbjct 1185 TCAAGGGTGATCGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCATG 1232 Score = 132 bits (146), Expect = 4e-26 Identities = 139/183 (76%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || ||||| || ||||||||||| ||| | ||||||| ||||||||||| Sbjct 1256 GTGGAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGCCCGTCCTCGAGCTG 1315 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || || ||| |||| ||||||||||| |||||||| |||||||||||||| ||| || Sbjct 1316 CTTGCCGGCGAAGATAAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGAATCTT 1375 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | |||| ||||||| | ||||||||| | ||| | || |||||||| Sbjct 1376 GGACTTGACGTTGTCGATAGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCGGT 1435 Query 118715 CAG 118717 || Sbjct 1436 GAG 1438 Score = 95.1 bits (104), Expect = 1e-14 Identities = 135/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||| | ||| | || ||||| || ||||||||||| || || || ||| ||||| Sbjct 744 CACGAGGTGCAACGTCGACTCCTTCTGAATGTTGTAGTCCGACAGCGTACGCCCGTCCTC 803 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 ||||| || || ||| | || || |||||||| |||||||| |||||||||||||| Sbjct 804 CAGCTGCTTGCCGGCGAAAATAAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTG 863 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || || || | || | ||||| | | ||||||||||| || | || || Sbjct 864 GATCTTGCTCTTGACGTTGTCAATCGTGTCAGAGGACTCGACCTCGAGCGTAATGGTCTT 923 Query 118709 GCCGGTCAGA 118718 ||| |||||| Sbjct 924 GCCAGTCAGA 933 >seq2 Length=620658 Score = 129 bits (142), Expect = 5e-25 Identities = 151/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || ||||| || || |||||||| || | ||||| ||||||||||| Sbjct 114272 GTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTG 114331 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || |||||| ||||||| |||||||| ||||| || |||||||||||||| || || Sbjct 114332 CTTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTT 114391 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | |||| |||||||| | ||||||||||| || | || ||||| || Sbjct 114392 CGACTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTCGAGAGTGATGGTCTTGCCCGT 114451 Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738 || || || || ||||||||||| Sbjct 114452 GAGGGTCTTGACGAAAATCTGCAT 114475 >seq14 Length=296601 Score = 118 bits (130), Expect = 9e-22 Identities = 119/155 (77%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 118584 TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTG 118643 ||||||||||| || || ||| |||||||||||||||| ||||| || |||||||||||| Sbjct 201536 TCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTG 201595 Query 118644 TCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACC 118703 || || || || || | |||| ||||| | | ||||||||||| ||| | Sbjct 201596 TCCTGGATCTTGGACTTGACGTTGTCGATCGTGTCGGAGGACTCGACCTCGAGGGTGATG 201655 Query 118704 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || ||||| |||||||| || || || |||||||| Sbjct 201656 GTCTTGCCCGTCAGAGTCTTGACGAAGATCTGCAT 201690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433829448284560