Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20oleaginosus_20[genbank_20GCA_5F001027345.1_202 015-06-12] 180 sequences; 19,835,558 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq54 259 1e-63 >seq54 Length=131832 Score = 259 bits (286), Expect = 1e-63 Identities = 618/924 (67%), Gaps = 24/924 (3%) Strand=Plus/Minus Query 248817 GTACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAA 248876 |||| | ||||| | ||||| ||||| ||| ||||| ||||| || || ||||| Sbjct 62680 GTACAACTTCTTCGGCTTCAAGACGCTTGAGCGCTCGTACCTCCTTCGCATCGACGGCAA 62621 Query 248877 GATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGA 248936 | ||| || || ||||||||| | ||||| || |||||||| |||||| || | Sbjct 62620 GGTCGCCGAGCGCCCGCAGCACATGCTCATGCGCGTTGCTGTCGGCATTCACGGCGAGAA 62561 Query 248937 CATAGAGAGCGTGCTCGAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCAC 248996 | | || |||| ||||||| |||| | ||| || |||| | || || || | Sbjct 62560 CCTTGACCGCGTCATCGAGACCTACAACCTCATGTCCGAGCGCTACTTCACTCACGCGTC 62501 Query 248997 ACCGACGCTCTTCAACGCCGGTACCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGC 249056 || || ||||||||||||||||| | || ||| || |||||||| ||| | || Sbjct 62500 GCCCACTCTCTTCAACGCCGGTACTCCCCACGCGCAGATGTCGTCGTGCTTCCTTGTCGC 62441 Query 249057 CATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAA-ACAGACGGCGAAGATTT 249115 |||| | |||||||| | ||||||||||| ||||| || || || | || |||| | Sbjct 62440 CATGAAGGACGACTCCATTGACGGCATTTACGACACTCTCAAGACCTGC-GCTCAGATCT 62382 Query 249116 CTAAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTACA 249175 | || || || || || |||||| | || |||||| || || ||||||||||||| Sbjct 62381 CGAAGACTGCCGGTGGTATTGGTCTCCACATCCACAACATTCGCGCCAAGGGTTCGTACA 62322 Query 249176 TCAAAGGTACAAATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGTCCA 249235 | ||||| || || | | ||||| || || | || || || || | | Sbjct 62321 TTGCCGGTACCAACGGCTACTCGAACGGTATTGTCCCTATGCTCCGTGCCTACGACGCGA 62262 Query 249236 CCGCCAGGTTCATCAACCAGGCCGG------GCGCCGAAAGGGGTCGTTCGCCATGTATT 249289 | ||| | | | | |||||| || ||||| || | || ||||| || Sbjct 62261 CTGCCCGCTACGTTGACCAGGGTGGCAACAAGCGCC---CCGGCGCCTTTGCCATCTACC 62205 Query 249290 TGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACG 249349 | || |||||||||||| | || || ||||| ||| | |||||| ||||||| | Sbjct 62204 TCGAGCCGTGGCACGCCGACGTGTTTGATTTCCTTGACCTCCGCAAGAACCACGGCAAGG 62145 Query 249350 AGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGCGCC 249409 || ||| | || |||||||||||||||| || ||| || | ||| | |||||| | Sbjct 62144 AGGAGATGCGCGCTCGTGACCTCTTCTACGCTCTCTGGATCCCGGACCTCTTCATGAAGC 62085 Query 249410 GCGTCAAGGCCGACGGCGATTGGACGCTTCTTTCTCCGTCCGA-CGCCCCGGACCTCATC 249468 ||||| || ||||||| || ||||| || | | || | || ||||||| ||| | Sbjct 62084 GCGTCGAGTCCGACGGAGACTGGACCCTCATGTGCCCTGCTGAGTGCCCCGG-CCTTGCC 62026 Query 249469 GATCTACACGGCGCCGACTTCGACCAAGCCTATAAGAAATACGAATCCAACGGCA---TC 249525 ||| | ||| | || ||||| || ||| |||| || || | |||| | Sbjct 62025 GATGTGCACTCGGAGGAGTTCGAGCAGCTCTACGAGAAGTATGAGCGTGAGGGCAAGGGC 61966 Query 249526 GGCAAGACAATCAAGGCTCGGACCCT---TTTTGCGAAGGTGGTGGAGTCCCAGATAGAG 249582 ||||||| |||||||| | || || || || | | ||||| |||||| ||| Sbjct 61965 CGCAAGACGATCAAGGCGCAGAAGCTCTGGTTCGCCA---TCCTGGAGGCCCAGACTGAG 61909 Query 249583 ACAGGGGGGCCGTATTAT-TTGTTCAAAGACGCGTGCAACGCCAAGAGTAACCAACGGCA 249641 || || || || | | || | | ||| |||||| |||| | ||| ||||| | ||| Sbjct 61908 ACTGGCGGTCCCT-TCATGCTCTACAAGGACGCGGCCAACTCGAAGTCGAACCAGCAGCA 61850 Query 249642 TCTTGGTACCATCCGCTCGTCAAATCTCTGTGCAGAGGTGATTCAATACTCGTCCAAGGA 249701 || || |||||| ||||| || ||||| | ||| | || | |||||||| || Sbjct 61849 CCTCGGCACCATCAAGTCGTCCAACCTCTGCACCGAGATCATCGAGTACTCGTCTCCCGA 61790 Query 249702 GGAGATTGCCGTCTGCAACCTGGC 249725 ||| |||| || ||||||||||| Sbjct 61789 TGAGGTTGCTGTGTGCAACCTGGC 61766 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073763923626240