Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20oleaginosus_20[genbank_20GCA_5F001027345.1_202 015-06-12] 180 sequences; 19,835,558 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq54 329 3e-85 seq55 174 1e-38 seq119 116 3e-21 seq14 111 1e-19 seq2 107 2e-18 >seq54 Length=131832 Score = 329 bits (364), Expect = 3e-85 Identities = 601/867 (69%), Gaps = 10/867 (1%) Strand=Plus/Plus Query 23017 GACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAAT 23076 || ||| |||||||| || ||||| || || ||||| || |||| |||||| | || Sbjct 61753 GAGGGCAATCGAGGCCAGGTTGCACACAGCAACCTCATCGGGAGACGAGTACTCGATGAT 61812 Query 23077 TTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATTGCT-CTGGTTGCTTTTTCGA- 23134 ||||| || || ||| |||| || ||||| | | ||| |||||| | ||||| Sbjct 61813 CTCGGTGCAGAGGTTGGACGACTTGATGGTGCCGAGGT-GCTGCTGGTT-CGACTTCGAG 61870 Query 23135 TTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATC 23194 ||| || ||||||||||||||| | || ||| ||||| ||| | ||| | ||| Sbjct 61871 TTGGCCGCGTCCTTGTAGAGCATGAAGGGACCGCCAGTCTCAGTCTGGGCCTCCAGGATG 61930 Query 23195 GCTCGCCACATAGTCTGAGCGTGAACACGTCGCACGTACCT-GCCTTCTTCCTCGTACTT 23253 || ||| | |||| || | | |||| || ||| ||| || ||| ||||| Sbjct 61931 GCGAACCAGAGCTTCTGCGCCTTGAT-CGTCTTGCGGCCCTTGCCCTCACGCTCATACTT 61989 Query 23254 TTGGTACAACGCGTCAAATTCGGCACCGTA-ACAGTCGGCCAGGCCGGGCGATTGCATC- 23311 | ||| | | || || || | || ||| ||||| |||||||| | | || | Sbjct 61990 CTCGTAGAGCTGCTCGAACTCCTCCGAGTGCACA-TCGGCAAGGCCGGGGCACT-CAGCA 62047 Query 23312 GGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATC 23371 || |||||||| |||| | ||| || ||||| |||| || || ||||| ||| Sbjct 62048 GGGCACATGAGGGTCCAGTCTCCGTCGGACTCGACGCGCTTCATGAAGAGGTCCGGGATC 62107 Query 23372 CATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAA 23431 || ||||||||||| || || || ||||||| |||||| |||||| |||||| | Sbjct 62108 CAGAGAGCGTAGAAGAGGTCACGAGCGCGCATCTCCTCCTTGCCGTGGTTCTTGCGGAGG 62167 Query 23432 TCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGT 23491 || | || || |||||||| || ||||||||||||||||| | |||||| ||||| || Sbjct 62168 TCAAGGAAATCAAACACGTCGGCGTGCCACGGCTCGAGGTAGATGGCAAAGGCGCCGGGG 62227 Query 23492 CTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGC 23551 | ||| ||||| ||||| || ||||| ||||| || || ||| | | ||||| || Sbjct 62228 CGCTTGTTGCCACCCTGGTCAACGTAGCGGGCAGTCGCGTCGTAGGCACGGAGCATAGGG 62287 Query 23552 ACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTG 23611 || | |||||| || |||| || || | |||||| || || |||| |||| Sbjct 62288 ACAATACCGTTCGAGTAGCCGTTGGTACCGGCAATGTACGAACCCTTGGCGCGAATGTTG 62347 Query 23612 TGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTG 23671 || | ||||| ||| || || ||| | | ||||| ||| ||||| || |||||| Sbjct 62348 TGGATGTGGAGACCAATACCACCGGCAGTCTTCGAGATCTGAGCGCAGGTCTTGAGAGTG 62407 Query 23672 TCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGC 23731 ||||| ||||| || ||| ||| || || | ||||| | ||| ||||| ||||| ||| Sbjct 62408 TCGTAAATGCCGTCAATGGAGTCGTCCTTCATGGCGACAAGGAAGCACGACGACATCTGC 62467 Query 23732 GCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGAC 23791 || | ||| ||| |||| ||| || || || ||||| || ||||| | | ||| Sbjct 62468 GCGTGGGGAGTACCGGCGTTGAAGAGAGTGGGCGACGCGTGAGTGAAGTAGCGCTCGGAC 62527 Query 23792 ATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACG 23851 || || ||||| || |||||| || |||| || ||| ||||| || |||| || ||| Sbjct 62528 ATGAGGTTGTAGGTCTCGATGACGCGGTCAAGGTTCTCGCCGTGAATGCCGACAGCAACG 62587 Query 23852 CGCATCATCATGTATTGAGGTCTCTCG 23878 ||||| | ||||| || || | |||| Sbjct 62588 CGCATGAGCATGTGCTGCGGGCGCTCG 62614 >seq55 Length=129735 Score = 174 bits (192), Expect = 1e-38 Identities = 543/832 (65%), Gaps = 19/832 (2%) Strand=Plus/Plus Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 || ||| | |||||||| ||||| | || || || ||||||| ||| || | |||| Sbjct 77804 ATCTGGCAGATGTACAAGAAGGCGCAGGCGTCCTTCTGGACCGCCGAGGAGATCAACCTC 77863 Query 57630 TCTAAGGATCTGAGCGATTGGGATTCC---CTCAAAGAATCTGAGAGAAATTTTATTAAA 57686 | || || ||| ||||| | ||||| || ||| | | || || | Sbjct 77864 GCGCCCGACCTCCACGACTGGGACAACAAGCTCAACGACAACGAGCGCTACTTCATCGAG 77923 Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746 |||||| | || || |||||||| || || || || || |||||||| | ||||| | Sbjct 77924 CACGTGCTCGCCTTCTTCGCCGCGTCAGACGGCATCGTCAACGAGAACCTTGTCGAGCGC 77983 Query 57747 TTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATT 57806 || | || || || | | ||||| | ||| ||||| || || | || Sbjct 77984 TTCTGCGGTGAGGTCCAGATCGCCGAGGCCAAGACCTTCTACGGCTTCCAGATCATGATG 78043 Query 57807 GAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTAC----GTGAAGGACAA 57862 || ||| | || || || | || || || |||||||| || ||| |||| || Sbjct 78044 GAGAACATCCACTCTGAGACCTACTCTCTTCTCATCGACACCTACATCCGTGACGGTGCC 78103 Query 57863 CGACGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGC 57922 || || ||| || || ||||| || || || || || ||| ||| |||||||| Sbjct 78104 CGCCGC--AAC-TAC-CTCTTCAAGGCCATTGAGACCATCCCCTGCATCAAGAAGAAGGC 78159 Query 57923 AGAGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGC 57982 || ||| | | ||||| || || | ||||||||||| | || ||||| Sbjct 78160 CGACTGGGCGCTGCGCTGGATCTCGGACGACAGCTCGTCGTTCGCCGAGCGCCTCATCGC 78219 Query 57983 GTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAA 58042 |||||| |||||||| || || ||||| |||||| || || | || || ||| | || Sbjct 78220 GTTCGCTGCCGTCGAGGGCATCTTCTTCTCGGGCTCGTTCGCCTCGATCTTCTGGCTCAA 78279 Query 58043 GAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGG 58102 ||| |||||||| |||||||| || || || |||||| | || |||||||||||||| Sbjct 78280 GAAGCGCGGCCTTATGCCCGGTCTTACCTTCTCGAACGAGCTTATTTCGCGCGACGAGGG 78339 Query 58103 TCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACAT-TGTCAATAAACCGACGCGGG 58161 ||||| || || || || ||||| | | | | ||| | | | || || | || Sbjct 78340 CCTCCACACCGACTTCGCATGCCTCCTCTTCACCCACCTCCGCCGCCGCCCCCAC-CCGG 78398 Query 58162 ATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAG 58221 | | || | | || ||| |||||| |||| |||||| | ||||| ||||||| | Sbjct 78399 ACCTTATTGAGAAGATCATCCGCGAGGCCGTCGAGATCGAGCAGGAGTTCCTCACCGAGG 78458 Query 58222 CCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTG 58281 |||| || || | | |||| |||||| | | |||| ||||||| ||||| | Sbjct 78459 CCCTTCCCGTCTCGCTTATCGGCATGAACGCCAAGCTCATGTGCCAGTACATCGAGTTCG 78518 Query 58282 TTGCCGACAGACTTTTGCTCGAACTGATTGGAGAGCGTCA---TTACAACACGAAAAATC 58338 | |||||| | | |||||| | || | | | | ||| ||| || | Sbjct 78519 TCGCCGACCGCC---TGCTCGTCGCCCTCGGCAACCCCAAGATCTGGAACTCGACCAACC 78575 Query 58339 CGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGA 58390 | || || || ||| | ||||||||||| |||||||| | ||||| ||||| Sbjct 78576 CCTTCGACTTCATGGAGATGATCTCGCTCCAGGGCAAGGCCAACTTCTTCGA 78627 >seq119 Length=35684 Score = 116 bits (128), Expect = 3e-21 Identities = 157/216 (73%), Gaps = 6/216 (3%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||||||||| ||||| ||||||||| | || || || |||| Sbjct 1232 CATGCAGATCTTCGTCAAGACTCTGACCGGCAAGACGATCACCCTTGAGGTCGAGTCGTC 1173 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAG-AATAGC--GGACAAGGAAGGCGTGCCGCCCGA 31308 |||| |||| | ||||| ||| || | | ||||||||| ||| | || || || Sbjct 1172 AGACACGATCGACAACGTCAA---GAGCAAGATCCAGGACAAGGAGGGCATTCCACCTGA 1116 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368 |||||||||||| || || |||||||| ||| | || ||| ||| | ||| || Sbjct 1115 CCAGCAGCGTCTCATCTTTGCTGGCAAGCAGCTTGAGGACGGGCGCACTCTCTCCGACTA 1056 Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 |||||||| || || || || || || || || || Sbjct 1055 CAACATTCAGAAGGAGTCTACCCTCCACCTCGTTCT 1020 Score = 93.3 bits (102), Expect = 4e-14 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 31214 CTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCGAAACGGTCAAA 31273 || || ||||| || |||||| | || || || | || |||| | |||| | ||||| Sbjct 1438 CTCACCGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACTATCGACAACGTCAAG 1379 Query 31274 CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGC 31333 | || ||||||||| ||| | || ||||||||||||||||| || ||||| ||| Sbjct 1378 TCCAAGATTCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGTCTTATCTTCGCCGGC 1319 Query 31334 AAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTCTT 31393 || ||| | || ||| ||| | ||| || |||||||| || || || ||||| Sbjct 1318 AAGCAGCTCGAGGACGGGCGCACTCTCTCCGACTACAACATTCAGAAGGAGTCCACTCTC 1259 Query 31394 CATCTGGTACTTAGACTGAGGGGCGG 31419 || || || ||| | || | ||||| Sbjct 1258 CACCTTGTCCTTCGTCTTCGTGGCGG 1233 >seq14 Length=296601 Score = 111 bits (122), Expect = 1e-19 Identities = 118/156 (76%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||||||||| ||||| || |||||| |||| || || | ||| Sbjct 201690 ATGCAGATCTTCGTCAAGACTCTGACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCC 201631 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || ||||||||| ||| | || ||||||||| Sbjct 201630 GACACGATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAG 201571 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC 31348 |||||||| || ||||| ||||| ||| | || ||| Sbjct 201570 CAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGAC 201535 >seq2 Length=620658 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| ||||| || || ||||| || ||||| |||| || || | || Sbjct 114475 ATGCAGATTTTCGTCAAGACCCTCACGGGCAAGACCATCACTCTCGAGGTCGAGTCCTCG 114416 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| || || ||||||||| ||| | || ||||||||| Sbjct 114415 GACACCATCGACAACGTCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAG 114356 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || ||||||||||| ||| | || ||| || | || || ||| Sbjct 114355 CAGCGCCTCATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAAC 114296 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || || || ||||| || || || || ||| | || | ||||||| Sbjct 114295 ATCCAGAAGGAGTCGACCCTCCACCTCGTTCTTCGTCTTCGCGGCGGTA 114247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445765397025600