Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20oleaginosus_20[genbank_20GCA_5F001027345.1_202 015-06-12] 180 sequences; 19,835,558 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq55 118 1e-21 >seq55 Length=129735 Score = 118 bits (130), Expect = 1e-21 Identities = 177/251 (71%), Gaps = 3/251 (1%) Strand=Plus/Minus Query 33582 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGT 33641 |||||||| ||| ||| || |||||||| | ||| | ||||| || || || || Sbjct 78360 CATGCGAAGTCGGTGTGGAGGCCCTCGTCGCGCGAAATAAGCTCGTTCGAGAAGGTAAGA 78301 Query 33642 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAG 33701 |||||||| ||||| ||||| || ||||| || || || ||||| || || || |||||| Sbjct 78300 CCGGGCATAAGGCCGCGCTTCTTGAGCCAGAAGATCGAGGCGAACGAGCCCGAGAAGAAG 78241 Query 33702 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATGT--- 33758 || || || || ||||| || || || || | ||| | | | |||||| | Sbjct 78240 ATGCCCTCGACGGCAGCGAACGCGATGAGGCGCTCGGCGAACGACGAGCTGTCGTCCGAG 78181 Query 33759 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 33818 ||||| | ||||| ||||||||||| || | || || || || || ||||| || Sbjct 78180 ATCCAGCGCAGCGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCAATGGCCTTG 78121 Query 33819 AAGAGATAGTT 33829 ||||| ||||| Sbjct 78120 AAGAGGTAGTT 78110 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629816182910400