Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20oleaginosus_20[genbank_20GCA_5F001027345.1_202 015-06-12] 180 sequences; 19,835,558 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq55 221 2e-52 seq54 138 2e-27 seq3 100 4e-16 >seq55 Length=129735 Score = 221 bits (244), Expect = 2e-52 Identities = 562/846 (66%), Gaps = 33/846 (4%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| | |||||||| ||||| ||||| ||||| ||||| | ||| ||| || | || Sbjct 77804 ATCTGGCAGATGTACAAGAAGGCGCAGGCGTCCTTCTGGACCGCCGAGGAGATCAACCTC 77863 Query 125079 TCCAAGGACCTGTACGATTGGGAGA-CTCGTTTGACTGAAACTGAGCGAGAGTTTATATC 125137 | ||||| |||| ||||| | | | | || ||| ||||| | || || Sbjct 77864 GCGCCCGACCTCCACGACTGGGACAACAAGCTCAACGACAAC-GAGCGCTACTTCATCGA 77922 Query 125138 GCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACAC 125196 |||| | | |||||||| |||| || || || ||||||||||| || || || || | Sbjct 77923 GCACGTGCTCGCCTTCTTCGCCGCGTCAGACGGCATCGTCAACGAGAACCTTGTCGAG-C 77981 Query 125197 GATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGA 125256 | |||| ||| | || | |||| | ||| ||||| ||||| ||||||| Sbjct 77982 GCTTCTGCGGTGAGGTCCAGATCGCCGAGGCCAAGACCTTCTACGGCTTCCAGATCATGA 78041 Query 125257 TTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGA---TC 125313 | |||||| | ||||| || | |||||| || || |||| ||||| || || | Sbjct 78042 TGGAGAACATCCACTCTGAGACCTACTCTCTTCTCATCGACACCTACATCCGTGACGGTG 78101 Query 125314 CGCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGG 125373 | | || || || ||||| || || || || || | || | || || |||| Sbjct 78102 CCCGCCGCAACTAC---CTCTTCAAGGCCATTGAGACCATCCCCTGCATCAAGAAGAAGG 78158 Query 125374 CTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGG 125433 | | |||| | | || |||||| ||||||| || |||| |||||| | || | | Sbjct 78159 CCGACTGGGCGCTGCGCTGGATCTCGGACGACAGCTCGTCGTTCGCCGAGCGCCTCATCG 78218 Query 125434 CATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCA 125493 | ||||| ||||| |||||||||||||| ||||| || || | ||||| ||||||| Sbjct 78219 CGTTCGCTGCCGTCGAGGGCATCTTCTTCTCGGGCTCGTTCGCCTCGATCTTCTGGCTCA 78278 Query 125494 AGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGG 125553 |||||||||| || |||||||| || || | |||||| |||| || || ||||||| Sbjct 78279 AGAAGCGCGGCCTTATGCCCGGTCTTACCTTCTCGAACGAGCTTATTTCGCGCGACGAGG 78338 Query 125554 GCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTC-CCGAGTGCAGA 125612 |||| ||| ||||| || || || || || | | || || | ||| || Sbjct 78339 GCCTCCACACCGACTTCGCATGCCTCCTCTT---CACCCACCTCCGCCGCCGCCCCCA-- 78393 Query 125613 TCCAGCGA------TGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAA 125666 || | || ||| ||| ||||| ||| ||||| ||| || || Sbjct 78394 -CCCG-GACCTTATTGAGAAGATCATC---------CGCGAGGCCGTCGAGATCGAGCAG 78442 Query 125667 GAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGC 125726 ||||| || ||||| |||| || ||| | || ||||||||| |||||| |||||| Sbjct 78443 GAGTTCCTCACCGAGGCCCTTCCCGTCTCGCTTATCGGCATGAACGCCAAGCTCATGTGC 78502 Query 125727 GAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGCAAGATTTAC 125786 ||||||| ||||| || || || || || || || | || |||||| | Sbjct 78503 CAGTACATCGAGTTCGTCGCCGACCGCCTGCTCGTCGCCCTCGGCAACCCCAAGATCTGG 78562 Query 125787 AACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTT 125846 ||| | | || ||||| || |||||| | || || || |||| ||| ||||||| Sbjct 78563 AACTCGACCAACCCCTTCGACTTCATGGAGATGATCTCGCTCCAGGGCAAGGCCAACTTC 78622 Query 125847 TTCGAG 125852 |||||| Sbjct 78623 TTCGAG 78628 >seq54 Length=131832 Score = 138 bits (152), Expect = 2e-27 Identities = 339/502 (68%), Gaps = 14/502 (3%) Strand=Plus/Minus Query 96864 CGATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCT 96923 || |||||| ||||| ||||| || || || ||||| | ||| ||||| | || || Sbjct 62256 CGCTACGTTGACCAGGGTGGCAACAAGCGCCCCGGCGCCTTTGCCATCTACCTCGAGCCG 62197 Query 96924 TGGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCA 96983 |||||||| ||||| ||||| || | || | ||||| ||| ||| || ||| Sbjct 62196 TGGCACGCCGACGTGTTTGATTTCCTTGACCTCCGCAAGAACCACGGCAAGGAGGAGATG 62137 Query 96984 CGAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAA- 97042 || || | ||| | || || || |||||| | || || | ||||||||||||||| | Sbjct 62136 CGCGCTCGTGACCTCTTCTACGCTCTCTGGATCCCGGACCTCTTCATGAAGCGCGTCGAG 62077 Query 97043 --CGACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGAT-TG 97099 |||||| | |||||| ||| |||||||| | || ||||| || ||||| || Sbjct 62076 TCCGACGGAG---ACTGGACCCTCATGTGCCCTGCTGAGTGCCCCGGCCTTGCCGATGTG 62020 Query 97100 CTGGGGCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGC-CGATACGTGA 97158 | | || ||||| ||| ||| | || |||| |||||| | || | Sbjct 62019 CACTCG-GAGGAGTTCGAGCAGCTCTACGAGAAGTATGAGCGTGAGGGCAAGGGCCGCAA 61961 Query 97159 GACGAGTCGATGCACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGA 97217 ||||| || | || | |||| || ||| |||||| || ||| ||| |||||||| Sbjct 61960 GACGA-TCAAGGCGC-AGAAGCTCTGGTTCGCCATCCTGGAGGCCCAGACTGAGACTGGC 61903 Query 97218 ACTCCGTACATTCTCTACAAGGATACCGTGAA-TCGCAACAGCAACCAACGCCACTTGGG 97276 ||| | ||| ||||||||||| | | || ||| || ||||| | ||| | || Sbjct 61902 GGTCCCTTCATGCTCTACAAGGACGCGGCCAACTCG-AAGTCGAACCAGCAGCACCTCGG 61844 Query 97277 CACCATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGAC 97336 |||||||||| ||||| || ||||| || || | |||||| | ||||| || ||| Sbjct 61843 CACCATCAAGTCGTCCAACCTCTGCACCGAGATCATCGAGTACTCGTCTCCCGATGAGGT 61784 Query 97337 GGCAGTTTGCGTTCTGGCATCG 97358 || || ||| ||||| ||| Sbjct 61783 TGCTGTGTGCAACCTGGCCTCG 61762 >seq3 Length=604691 Score = 100 bits (110), Expect = 4e-16 Identities = 99/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 125445 GTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGA 125504 || |||||||||||||| || || ||||| || ||||| ||||||||||||||||| Sbjct 403621 GTGGAGGGCATCTTCTTCTCTGGGTCATTTGCAGCAATCTTCTGGCTCAAGAAGCGCGGG 403680 Query 125505 CTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGCCTACACTGT 125564 || |||| ||| ||||| ||| |||||| | || || || || |||||| | ||| Sbjct 403681 CTGATGCGCGGCCTGACCTTCAGCAACGAGCTCATCTCGCGTGATGAGGGCATGCACACC 403740 Query 125565 GACTTTGC 125572 |||||||| Sbjct 403741 GACTTTGC 403748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741057532616800