Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20oleaginosus_20[genbank_20GCA_5F001027345.1_202 015-06-12] 180 sequences; 19,835,558 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq3 147 3e-31 seq69 113 7e-21 >seq3 Length=604691 Score = 147 bits (162), Expect = 3e-31 Identities = 165/221 (75%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 16472 GGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCT 16531 || ||||||||||| |||||||| ||||| ||||| ||||| || ||||||||| | || Sbjct 49165 GGTATCACCAAGCCCGCTATCCGCCGTCTCGCTCGCCGTGGCGGTGTCAAGCGTATTTCC 49224 Query 16532 GGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCAT 16591 || | |||| || |||| |||| ||| ||||||||||||| ||| ||| |||| Sbjct 49225 GGCCTCATCTACGAGGAGACCCGTGGTGTCCTGAAGATCTTCCTTGAGAACGTCATCCGC 49284 Query 16592 GATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTC 16651 || | || ||| ||||||||||| || || ||||| |||||||| | || ||||| Sbjct 49285 GACTCCGTCACCTACACCGAGCACGCCAAGCGCAAGACCGTCACCTCGCTCGACGTCGTC 49344 Query 16652 TATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 || || | || || || ||||| | |||| ||||| || Sbjct 49345 TACGCGCTCAAGCGCCAGGGCCGCACCCTTTACGGTTTCGG 49385 >seq69 Length=108257 Score = 113 bits (124), Expect = 7e-21 Identities = 148/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 16472 GGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCT 16531 || || |||||||| || ||||| ||||| || || ||||| || ||||||||| |||| Sbjct 39171 GGTATTACCAAGCCCGCCATCCGCCGTCTCGCGCGCCGTGGCGGTGTCAAGCGTATCTCG 39112 Query 16532 GGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCAT 16591 || | | || || |||| || | || | |||||||||||| ||| ||| |||| Sbjct 39111 GGCCTCATTTACGAGGAGACGCGCGGCGTCCTCAAGATCTTCCTCGAGAACGTCATCCGC 39052 Query 16592 GATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTC 16651 || | || || ||||||||||| || || |||||||||||||| | || | || Sbjct 39051 GACTCGGTCACGTACACCGAGCACGCGAAGCGCAAGACTGTCACCTCGCTCGACGTTGTG 38992 Query 16652 TATGCATTGAAACGTCAAGGCCGTA 16676 || || | || || || ||||||| Sbjct 38991 TACGCCCTCAAGCGCCAGGGCCGTA 38967 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075035424740