Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20oleaginosus_20[genbank_20GCA_5F001027345.1_202 015-06-12] 180 sequences; 19,835,558 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq55 122 1e-22 >seq55 Length=129735 Score = 122 bits (134), Expect = 1e-22 Identities = 178/251 (71%), Gaps = 3/251 (1%) Strand=Plus/Minus Query 33304 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 33363 |||||||| ||| ||| || |||||||| | ||| || ||||| || || || || Sbjct 78360 CATGCGAAGTCGGTGTGGAGGCCCTCGTCGCGCGAAATAAGCTCGTTCGAGAAGGTAAGA 78301 Query 33364 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAG 33423 |||||||| ||||| ||||| || ||||| || || || ||||| || || || |||||| Sbjct 78300 CCGGGCATAAGGCCGCGCTTCTTGAGCCAGAAGATCGAGGCGAACGAGCCCGAGAAGAAG 78241 Query 33424 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATGT--- 33480 || || || || ||||| || || || || | ||| | | | |||||| | Sbjct 78240 ATGCCCTCGACGGCAGCGAACGCGATGAGGCGCTCGGCGAACGACGAGCTGTCGTCCGAG 78181 Query 33481 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 33540 ||||| | ||||| ||||||||||| || | || || || || || ||||| || Sbjct 78180 ATCCAGCGCAGCGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCAATGGCCTTG 78121 Query 33541 AAGAGATAGTT 33551 ||||| ||||| Sbjct 78120 AAGAGGTAGTT 78110 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622945798368800