Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20oleaginosus_20[genbank_20GCA_5F001027345.1_202 015-06-12] 180 sequences; 19,835,558 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq119 134 1e-26 seq2 134 1e-26 seq55 113 4e-20 seq14 113 4e-20 seq3 109 5e-19 seq1 102 8e-17 seq26 82.4 7e-11 >seq119 Length=35684 Score = 134 bits (148), Expect = 1e-26 Identities = 167/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| ||||| | |||||| || | || | ||| |||||||| ||||||||||| ||| Sbjct 1004 GCCGCCGCGGAGACGCAGAACGAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGA 1063 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | |||||| |||||| ||||||||||| || |||| | |||||||||||| || || Sbjct 1064 GAGAGTGCGCCCGTCCTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCAGGTGG 1123 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || ||||| ||| || ||||| | || | || || | ||||||| Sbjct 1124 AATGCCCTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATCGTGTCTGACGACTCGAC 1183 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | ||| | || || ||||| ||||| || ||||| ||||||||| Sbjct 1184 CTCAAGGGTGATCGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCATG 1232 Score = 116 bits (128), Expect = 3e-21 Identities = 150/207 (72%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || || | ||| || || | || | || |||||||| ||||||||||| ||| Sbjct 1232 GCCGCCACGAAGACGAAGGACAAGGTGGAGAGTGGACTCCTTCTGAATGTTGTAGTCGGA 1291 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | |||||| |||||| ||||||||||| ||| |||| | |||||||||||| ||||| Sbjct 1292 GAGAGTGCGCCCGTCCTCGAGCTGCTTGCCGGCGAAGATAAGACGCTGCTGGTCGGGAGG 1351 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || ||||| || || ||||| | || | ||| || | |||||||| Sbjct 1352 GATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATAGTGTCCGAGGACTCGAC 1411 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAG 131213 || | ||| | ||| || ||||| || Sbjct 1412 CTCAAGGGTGATGGTCTTGCCGGTGAG 1438 Score = 113 bits (124), Expect = 4e-20 Identities = 149/207 (72%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||| ||||| | || | ||||||||||| ||||||||||| || | Sbjct 727 CCGCCACGGAGACGGAGCACGAGGTGCAACGTCGACTCCTTCTGAATGTTGTAGTCCGAC 786 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || ||| |||||| ||||||||||| ||| | || | ||||||||||| |||||| Sbjct 787 AGCGTACGCCCGTCCTCCAGCTGCTTGCCGGCGAAAATAAGGCGCTGCTGGTCGGGAGGG 846 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || || | |||||||| Sbjct 847 ATGCCCTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCAATCGTGTCAGAGGACTCGACC 906 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGA 131214 |||| |||| ||| || || || ||| Sbjct 907 TCGAGCGTAATGGTCTTGCCAGTCAGA 933 >seq2 Length=620658 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || ||||| | ||| || || | || | |||||||||||| || |||||||| || Sbjct 114249 CCGCCGCGAAGACGAAGAACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 114308 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| ||||||||||| ||| |||| | ||||||||||| || ||| Sbjct 114309 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGGGGG 114368 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| ||| ||||| | || | || || | |||||||| Sbjct 114369 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCCGAGGACTCGACC 114428 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | ||| || || || || || || |||||||||||||| Sbjct 114429 TCGAGAGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAAATCTGCAT 114475 >seq55 Length=129735 Score = 113 bits (124), Expect = 4e-20 Identities = 322/491 (66%), Gaps = 7/491 (1%) Strand=Plus/Plus Query 46099 AAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCGACTTTCGCCGAGCGT 46158 ||||| ||||||||||| || |||||| | || | || | ||||||||||| Sbjct 78152 AAGAAGGCCGACTGGGCGCTGCGCTGGATCTCGGACGACAGCTCGTCGTTCGCCGAGCGC 78211 Query 46159 ATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTTGCCGCCATCTTT 46218 | | || || || || |||||| |||| || || ||| || ||| | ||||| Sbjct 78212 CTCATCGCGTTCGCTGCCGTCGAGGGCATCTTCTTCTCGGGCTCGTTCGCCTCGATCTTC 78271 Query 46219 TACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATATCGCGC 46278 | |||| | ||| | |||||||| || || || |||||||| || |||||| Sbjct 78272 TGGCTCAAGAAGCGCGGCCTTATGCCCGGTCTTACCTTCTCGAACGAGCTTATTTCGCGC 78331 Query 46279 GACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACACTCGCGTGCACGACAAG 46338 ||||||||||| || || ||||| || || ||| || ||| | | | | | | | Sbjct 78332 GACGAGGGCCTCCACACCGACTTCGCATGCCTCCTCT---TCACCCACCTCCGCCGC-CG 78387 Query 46339 CTTGCGCCCGACACCGTGCTGAG--CATGTTCAAGGAGGCGGTGGCCATTGAGAAGGAGT 46396 | | |||| ||| | |||| || || ||||| || | || ||| |||||| Sbjct 78388 CCCCCACCCG-GACCTTATTGAGAAGATCATCCGCGAGGCCGTCGAGATCGAGCAGGAGT 78446 Query 46397 TTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCACAGTCAATGTGCGACT 46456 | | || | || || |||| | || | ||||||||||| || |||||| | | Sbjct 78447 TCCTCACCGAGGCCCTTCCCGTCTCGCTTATCGGCATGAACGCCAAGCTCATGTGCCAGT 78506 Query 46457 ACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACCAGCCGAAGCATTTTCACG 46516 |||||||||| || || ||||| |||||||| || | | || ||| | || Sbjct 78507 ACATCGAGTTCGTCGCCGACCGCCTGCTCGTCGCCCTCGGCAACCCCAAGATCTGGAACT 78566 Query 46517 CGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCAAAACTAATTTTTTCG 46576 || ||| || || || || ||| | | ||||| || ||||||| | || || |||| Sbjct 78567 CGACCAACCCCTTCGACTTCATGGAGATGATCTCGCTCCAGGGCAAGGCCAACTTCTTCG 78626 Query 46577 AAAAGCGCGTC 46587 | ||||||| Sbjct 78627 AGTCGCGCGTC 78637 >seq14 Length=296601 Score = 113 bits (124), Expect = 4e-20 Identities = 124/165 (75%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 131070 GGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGAT 131129 |||||| |||||| ||||||||||| ||| |||| | |||||||||||| || ||||| Sbjct 201526 GGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGGAT 201585 Query 131130 TCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTC 131189 || || ||||| ||| || ||||| | || | || |||| |||||||| || Sbjct 201586 GCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATCGTGTCGGAGGACTCGACCTC 201645 Query 131190 GACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || ||| | ||| || || || ||||| || ||||| |||||||| Sbjct 201646 GAGGGTGATGGTCTTGCCCGTCAGAGTCTTGACGAAGATCTGCAT 201690 >seq3 Length=604691 Score = 109 bits (120), Expect = 5e-19 Identities = 198/281 (70%), Gaps = 13/281 (5%) Strand=Plus/Plus Query 46165 GCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTTGCCGCCATCTTTTACATC 46224 || ||||| |||||||||| |||| || ||||| ||||| || ||||| | || Sbjct 403609 GCATTTGCTTGTGTGGAGGGCATCTTCTTCTCTGGGTCATTTGCAGCAATCTTCTGGCTC 403668 Query 46225 AA-AACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATATCGCGCGACGA 46283 || || | |||| | |||| ||||||||| || ||||||||||| || ||||| || || Sbjct 403669 AAGAAGCGCGGGC-TGATGCGCGGCCTGACCTTCAGCAACGAGCTCATCTCGCGTGATGA 403727 Query 46284 GGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACACT--CGCGTGCACGACAAGCT- 46340 |||| |||| || |||||||| || ||| || || || | | | |||| ||| Sbjct 403728 GGGCATGCACACCGACTTTGCATG--TCTGCTCTACCAGTACCTCAAGCAC----CGCTG 403781 Query 46341 TGCGCCCGACA-CCGTGCTGAGCATGTTCAAGGAGGCGGTGGCCATTGAGAAGGAGTTTT 46399 | || | |||| |||| | || ||| ||||| || | || |||||||| || | Sbjct 403782 TTCG-CAGACAGAGGTGCACCGTATCGTCAGTGAGGCTGTCGAGATCGAGAAGGAATTCT 403840 Query 46400 TTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCA 46440 | || | |||| ||||| |||||| | || || |||||| Sbjct 403841 TGACAGACGCATTGCCCTGCGCCCTGATCGGTATCAACGCA 403881 >seq1 Length=646641 Score = 102 bits (112), Expect = 8e-17 Identities = 112/145 (77%), Gaps = 8/145 (6%) Strand=Plus/Minus Query 51802 GCCTCTATGTTGCCGAGATCGCCCACGTGTCG---CTCGGCGGAGTTGGGTGCGCCGTGG 51858 |||| ||||| ||||| || |||||||| || || | |||| || |||||||| Sbjct 136601 GCCTTGATGTTACCGAGGTCACCCACGTGCCGGTTCTTGTCGGAC---GGGGCGCCGTGA 136545 Query 51859 T-GTTTGCCAAGGGGATTAAAGTGCTCGCCGGCGGACGTGCACCCGTTGCTGGTGTCGCC 51917 | || | | || ||| || ||||| |||| | |||| ||||||||| |||| |||||| Sbjct 136544 TCGTGTCCGAAAGGG-TTGTAGTGCGCGCCTGTGGACATGCACCCGTCGCTGAGGTCGCC 136486 Query 51918 GAACTCGTGCACGTGAAAGCCGTGC 51942 ||||||||||||||| ||||||||| Sbjct 136485 GAACTCGTGCACGTGGAAGCCGTGC 136461 >seq26 Length=226032 Score = 82.4 bits (90), Expect = 7e-11 Identities = 100/134 (75%), Gaps = 2/134 (1%) Strand=Plus/Minus Query 51810 GTTGCCGAGATCGCCCACGTGTCGCTCGGCGGAGTTGGGTGCGCCGTGGTGTTTGCCAAG 51869 ||||||||| || || ||| ||||| | | | |||| ||||||||| ||||| | Sbjct 26404 GTTGCCGAGGTCACCGGTGTGGCGCTCCGAGTCGGTGGGGCCGCCGTGGTTCTTGCCGTG 26345 Query 51870 GGGATTAAAGTGCTCGCCGGCGGACGTGCA-CCCGTTGCTGGTGTCGCCGAACTCGTGCA 51928 ||| || ||||| ||||||| || ||||| |||| | | ||||||||||| ||| | Sbjct 26344 GGGGTTGAAGTGGGCGCCGGCCGAGGTGCAGCCCGACGAGAG-GTCGCCGAACTGGTGGA 26286 Query 51929 CGTGAAAGCCGTGC 51942 |||| |||||| || Sbjct 26285 CGTGGAAGCCGCGC 26272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472011737971200