Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20oleaginosus_20[genbank_20GCA_5F001027345.1_202 015-06-12] 180 sequences; 19,835,558 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq55 104 3e-17 >seq55 Length=129735 Score = 104 bits (114), Expect = 3e-17 Identities = 174/251 (69%), Gaps = 3/251 (1%) Strand=Plus/Minus Query 32661 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 32720 |||||||| ||| ||| || |||||||| | ||| | ||||| || || || || Sbjct 78360 CATGCGAAGTCGGTGTGGAGGCCCTCGTCGCGCGAAATAAGCTCGTTCGAGAAGGTAAGA 78301 Query 32721 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 32780 |||||||| ||||| ||||| || ||||| || || || || || || || || ||||| Sbjct 78300 CCGGGCATAAGGCCGCGCTTCTTGAGCCAGAAGATCGAGGCGAACGAGCCCGAGAAGAAG 78241 Query 32781 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATGT--- 32837 || || || || || || || || || || | ||| | | | |||||| | Sbjct 78240 ATGCCCTCGACGGCAGCGAACGCGATGAGGCGCTCGGCGAACGACGAGCTGTCGTCCGAG 78181 Query 32838 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTA 32897 ||||| | ||||| ||||||||||| || | || || || ||||| || || || Sbjct 78180 ATCCAGCGCAGCGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCAATGGCCTTG 78121 Query 32898 AAGAGATAGTT 32908 ||||| ||||| Sbjct 78120 AAGAGGTAGTT 78110 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633630574328000