Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20oleaginosus_20[genbank_20GCA_5F001027345.1_202 015-06-12] 180 sequences; 19,835,558 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq119 122 7e-23 seq2 104 2e-17 seq14 91.5 1e-13 >seq119 Length=35684 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || ||| | ||||| || ||| |||| ||||| || || | | Sbjct 1231 ATGCAGATCTTCGTCAAGACTCTGACCGGCAAGACGATCACCCTTGAGGTCGAGTCGTCA 1172 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | |||| || || || ||||||||||| |||||||| || || Sbjct 1171 GACACGATCGACAACGTCAAGAGCAAGATCCAGGACAAGGAGGGCATTCCACCTGACCAG 1112 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || ||||| ||||| ||| | ||||| ||||| ||||||| |||||| Sbjct 1111 CAGCGTCTCATCTTTGCTGGCAAGCAGCTTGAGGACGGGCGCACTCTCTCCGACTACAAC 1052 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 ||||| || || || ||| | || | ||| |||| | ||||| || Sbjct 1051 ATTCAGAAGGAGTCTACCCTCCACCTCGTTCTGCGTCTCCGCGGCGG 1005 Score = 109 bits (120), Expect = 5e-19 Identities = 128/173 (74%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 ||||| || || |||| ||||| || || || | || || | ||| | |||| Sbjct 1435 ACCGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACTATCGACAACGTCAAGTCC 1376 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || ||||| ||||||||||| || || ||||| || || |||||||| || |||||||| Sbjct 1375 AAGATTCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGTCTTATCTTCGCCGGCAAG 1316 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415 ||| | ||||| ||||| ||||||| ||||||||||| || || ||||| Sbjct 1315 CAGCTCGAGGACGGGCGCACTCTCTCCGACTACAACATTCAGAAGGAGTCCAC 1263 >seq2 Length=620658 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||| ||||| || || || | || || || || ||||||| || || || || Sbjct 114477 AGATGCAGATTTTCGTCAAGACCCTCACGGGCAAGACCATCACTCTCGAGGTCGAGTCCT 114418 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 | || ||| | ||| | |||| || || || ||||||||||| || || ||||| | Sbjct 114417 CGGACACCATCGACAACGTCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCCCCCGACC 114358 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 | || || || || || || ||||| ||| | ||||| ||||||| | || || |||| Sbjct 114357 AGCAGCGCCTCATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACA 114298 Query 22397 ACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 |||| || || || || ||| | || | ||| | || | ||||| ||| Sbjct 114297 ACATCCAGAAGGAGTCGACCCTCCACCTCGTTCTTCGTCTTCGCGGCGGT 114248 >seq14 Length=296601 Score = 91.5 bits (100), Expect = 1e-13 Identities = 128/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||| || || || || ||| | || || || || |||| || || || || || Sbjct 201692 AGATGCAGATCTTCGTCAAGACTCTGACGGGCAAGACCATCACCCTCGAGGTCGAGTCCT 201633 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 |||| || | ||| | |||| || || || ||||||||||| || || ||||| | Sbjct 201632 CCGACACGATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACC 201573 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 | || ||||| || || |||||||| ||| | ||||| ||||||| | || || |||| Sbjct 201572 AGCAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACA 201513 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727079221700