Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20oleaginosus_20[genbank_20GCA_5F001027345.1_202 015-06-12] 180 sequences; 19,835,558 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq119 134 3e-26 seq2 113 1e-19 seq14 111 4e-19 >seq119 Length=35684 Score = 134 bits (148), Expect = 3e-26 Identities = 172/233 (74%), Gaps = 3/233 (1%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| || |||||||| | || ||||| || | || || || || || || |||| Sbjct 1001 CATG-CCGCCGCGGAGACGCAGAACGAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAGT 1059 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 ||| ||| ||||| ||||| || | || || || || ||||| |||||||| || | Sbjct 1060 CGGAGAGAGTGCGCCCGTCCTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCAG 1119 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGAT 288420 ||| || || || || |||||||| || ||| || ||||| || || | || ||| Sbjct 1120 GTGGAATGCCCTCCTTGTCCTGGATCTT-GCTCTTGACGTTGTCGATCGTGTCTGACGAC 1178 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || ||||||||||| |||||||||||||||||||| |||||||| Sbjct 1179 TCGACCTCAAGGGTGATCGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 1231 >seq2 Length=620658 Score = 113 bits (124), Expect = 1e-19 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || ||||| || | ||| ||||| || | || || || ||||| || ||||| | Sbjct 114249 CCGCCGCGAAGACGAAGAACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 114308 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || |||||||| || ||||| || ||| Sbjct 114309 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGGGGG 114368 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| |||| || ||||| || || | || || || || Sbjct 114369 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCCGAGGACTCGACC 114428 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| ||||| || || || ||||||||||| |||||||| Sbjct 114429 TCGAGAGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAAATCTGCAT 114475 >seq14 Length=296601 Score = 111 bits (122), Expect = 4e-19 Identities = 130/176 (74%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 288298 TAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGA 288357 ||||| | || ||||| ||||| || | || || || |||||||| |||||||| || Sbjct 201515 TAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGG 201574 Query 288358 GAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTC 288417 ||||| || || || |||||||| || | || ||||| || || | ||| Sbjct 201575 TCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATCGTGTCGGAG 201634 Query 288418 GATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||| ||||| ||||| || ||||||||||||||||| |||||||| Sbjct 201635 GACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGAGTCTTGACGAAGATCTGCAT 201690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179651679422040