Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20oleaginosus_20[genbank_20GCA_5F001027345.1_202 015-06-12] 180 sequences; 19,835,558 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq55 141 9e-29 seq54 123 2e-23 seq119 120 3e-22 seq2 86.0 6e-12 >seq55 Length=129735 Score = 141 bits (156), Expect = 9e-29 Identities = 488/749 (65%), Gaps = 13/749 (2%) Strand=Plus/Plus Query 52086 AACGATGACGAGCGCTATTTTATCAAGCACGTGTTGGCGTTCTTCGCCGCCGCCGATAGC 52145 ||||| |||||||||| || ||| |||||||| | || ||||||||||| | || || Sbjct 77897 AACGACAACGAGCGCTACTTCATCGAGCACGTGCTCGCCTTCTTCGCCGCGTCAGACGGC 77956 Query 52146 ATCGTGAACATTAACCTCATCGAGTACATGCAGCGGAACGTTCCGGAACTC-GAGGCGCA 52204 ||||| ||| ||||| ||||| | | | |||| | ||| || | | ||||| || Sbjct 77957 ATCGTCAACGAGAACCTTGTCGAGCGCTT-CTGCGGTGAGGTCCAGATCGCCGAGGC-CA 78014 Query 52205 ATACTTT-TATAATTTGCAAGTGCTCATCGAGTGCGTGCACACGGAGATGTACAATCTGC 52263 | || || || || || | | || ||| | | ||| | |||| ||| ||| | Sbjct 78015 AGACCTTCTACGGCTTCCAGATCATGATGGAGAACATCCACTCTGAGACCTACTCTCTTC 78074 Query 52264 TCATTGAGCAGCTG-ATAAAAGATGA-GCACGAGCGCGACACGCTGCTGAATGCGTTCGA 52321 |||| || || || || || | || || ||| || || | || || | || Sbjct 78075 TCATCGA-CACCTACATCCGTGACGGTGCCCGC-CGCAACTACCTCTTCAAGGCCATTGA 78132 Query 52322 GCACGTGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACAC 52381 | | | || ||| | || ||||| | ||||| || |||||| | ||||| Sbjct 78133 GACCATCCCCTGCATCAAGAAGAAGGCCGACTGGGCGCTGCGCTGGATCTCGGACGACAG 78192 Query 52382 CGCCACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGG 52441 | | || | ||||||||| | | || ||||| ||||||||| | || || || || Sbjct 78193 CTCGTCGTTCGCCGAGCGCCTCATCGCGTTCGCTGCCGTCGAGGGCATCTTCTTCTCGGG 78252 Query 52442 CAGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAG 52501 | || ||| | ||||| | | || | | ||| | |||||||| || || ||| Sbjct 78253 CTCGTTCGCCTCGATCTTCTGGCTCAAGAAGCGCGGCCTTATGCCCGGTCTTACCTTCTC 78312 Query 52502 CAACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAA 52561 |||||| | || ||||||||||| || || ||||| ||||| || |||||| || || Sbjct 78313 GAACGAGCTTATTTCGCGCGACGAGGGCCTCCACACCGACTTCGCATGCCTCCTCTTCAC 78372 Query 52562 G-ACGCGCGTGACCGAAAAATTGGATTCGGACACGATCCTGAGCATGTTCAAGGAGGCGG 52620 || || ||| | ||||| || || || || ||||| | Sbjct 78373 CCACCTCCGCCGCCGCCCCC----ACCCGGACCTTATTGAGAAGATCATCCGCGAGGCCG 78428 Query 52621 TGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACG 52680 | | ||||| ||||||| | || | || || || ||| ||| | |||||||||| Sbjct 78429 TCGAGATCGAGCAGGAGTTCCTCACCGAGGCCCTTCCCGTCTCGCTTATCGGCATGAACG 78488 Query 52681 CGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGC 52740 | || ||||||| ||||||||||||| || || || || ||| | || ||||| Sbjct 78489 CCAAGCTCATGTGCCAGTACATCGAGTTCGTCGCCGACCGCCTGCTCGTCGCCCTCGGCA 78548 Query 52741 AGCCAAAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGG 52800 | || ||| || ||| | ||| || || || || ||| | | || ||||| ||| Sbjct 78549 ACCCCAAGATCTGGAACTCGACCAACCCCTTCGACTTCATGGAGATGATCTCGCTCCAGG 78608 Query 52801 GCAAGACCAACTTTTTCGAGAAGCGAGTC 52829 ||||| ||||||| |||||| ||| ||| Sbjct 78609 GCAAGGCCAACTTCTTCGAGTCGCGCGTC 78637 >seq54 Length=131832 Score = 123 bits (136), Expect = 2e-23 Identities = 562/874 (64%), Gaps = 23/874 (3%) Strand=Plus/Plus Query 153596 GGCAATAGACGCCAGATTACAGACGGCCGTCTCTTCGGC-GTCGCTGTACTGCACGATCT 153654 |||||| || ||||| || || || || ||| |||| | || ||||| | ||||| Sbjct 61756 GGCAATCGAGGCCAGGTTGCACACAGCAACCTCATCGGGAGACGA-GTACTCGATGATCT 61814 Query 153655 CGGCGCAGAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGA-TTG 153713 ||| |||||||||| | || ||| ||| | | ||||| || || ||| ||| Sbjct 61815 CGGTGCAGAGGTTGGACGACTTGATGGTGCCGAGGTGCTGCTGGTTCGACTT-CGAGTTG 61873 Query 153714 CACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCGACGATA--- 153770 |||||| ||| |||||||| | || ||||| ||||| || | || | ||| Sbjct 61874 GCCGCGTCCTTGTAGAGCATGAAGGGACCGCCAGTCTCAGTCTGGGCCTCCAGGATGGCG 61933 Query 153771 AACCTATGCAGGTCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGCTCTCGTATCGC 153830 |||| || | |||||| | | || || |||||| | ||| || | Sbjct 61934 AACCAGAGC---TTCTGCGCCTTGATCGTCTTGCGGCCCTTGCCCTCACGCTCATACTTC 61990 Query 153831 TCGTACAGTCGCTCAAACTCGTCGCCGTAGCAG-TCGGCGAGGCCGGGACACTGATGCGG 153889 ||||| || |||| ||||| || || ||| ||||| |||||||| |||| | || Sbjct 61991 TCGTAGAGCTGCTCGAACTCCTCCGAGT-GCACATCGGCAAGGCCGGGGCACTCAGCAGG 62049 Query 153890 ACACATCAGCGACCACATATCGTCGGCGTTGACGCGTCGCATGAACAGATCCGGCACCCA 153949 ||||| || | ||| |||||| | |||||| |||||| || ||||| | ||| Sbjct 62050 GCACATGAGGGTCCAGTCTCCGTCGGACTCGACGCGCTTCATGAAGAGGTCCGGGATCCA 62109 Query 153950 GAGCGCGTACATGAGGTCGCGCGCCTTGCAA-TCCTCCGCGCCCATGTTGCGTTTCAGA- 154007 ||| ||||| | |||||| || || ||| |||||| ||| ||| || | || Sbjct 62110 GAGAGCGTAGAAGAGGTCACGAGCGC-GCATCTCCTCCTTGCCGTGGTTC--TTGCGGAG 62166 Query 154008 -TTGAGCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTT 154066 | || | | | | |||||||||||| || || | ||||| ||| | ||| || Sbjct 62167 GTCAAGGAAATCAAACACGTCGGCGTGCCACGGCTCGAGGTAGATGGCAAAGGCGCCGGG 62226 Query 154067 ACGCTTT---CCGCCCTGATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGG 154123 ||||| || ||||| || |||| ||| | | || | || | || | ||| || Sbjct 62227 GCGCTTGTTGCCACCCTGGTCAACGTAGCGGGCAGTCGCGTCGTAGGCACGGAGCATAGG 62286 Query 154124 TTCCAGGCCGCTTGCGGTGCCGTTGGTCGAATTGATCTTGCTGCCGCGGGCGCGCACTTG 154183 | | ||| | | | ||||||||| || | || |||||| | | Sbjct 62287 GACAATACCGTTCGAGTAGCCGTTGGTACCGGCAATGTACGAACCCTTGGCGCGAATGTT 62346 Query 154184 ATGCACGTTAACGCCAATGCCGCCGCCGTACTTTGATATGGCAGCGCAGTCGCCCAGCGT 154243 || | || | ||||| || ||| | ||| || || ||||||| || || Sbjct 62347 GTGGATGTGGAGACCAATACCACCGGCAGTCTTCGAGATCTGAGCGCAGGTCTTGAGAGT 62406 Query 154244 CCTGTAGATGCCGTCGATGCTATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTG 154303 ||| |||||||| ||| ||||| | | ||| | ||| ||||| |||| || Sbjct 62407 GTCGTAAATGCCGTCAATGGAGTCGTCCTTCATGGCGACAAGGAAGCACGACGACATCTG 62466 Query 154304 CGGAATGCGCGTTCCCGCCGAAAAGAGGGTGGGACTCGCGTGCGTAAAC-AGTTTTTGGC 154362 || | | || || || ||||| ||||| |||||| || || || | || Sbjct 62467 CGCGTGGGGAGTACCGGCGTTGAAGAGAGTGGGCGACGCGTGAGTGAAGTAGCGCTCGGA 62526 Query 154363 TCATCATGCGGTACGTTTCGATGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGA 154422 ||| | | ||| || |||||| || || | | |||||||||||||||| || | Sbjct 62527 -CATGAGGTTGTAGGTCTCGATGACGCGGTCAAGGTTCTCGCCGTGAATGCCGACAGCAA 62585 Query 154423 CGCGCATGAGCATGTGCTGCGGACGTTCGGCGAC 154456 |||||||||||||||||||||| || |||||||| Sbjct 62586 CGCGCATGAGCATGTGCTGCGGGCGCTCGGCGAC 62619 >seq119 Length=35684 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 |||||| || | ||||| ||| | || | | | |||||||| ||||||||||||||| Sbjct 1004 GCCGCCGCGGAGACGCAGAACGAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGA 1063 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | ||| ||| |||||| || || || || | | |||| |||||||| ||||| || || Sbjct 1064 GAGAGTGCGCCCGTCCTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCAGGTGG 1123 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || || ||||| ||| || || | | || | ||||| | |||||| || Sbjct 1124 AATGCCCTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATCGTGTCTGACGACTCGAC 1183 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 ||| | || | ||| || || |||||||| || || || ||||||||| Sbjct 1184 CTCAAGGGTGATCGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCATG 1232 Score = 89.7 bits (98), Expect = 5e-13 Identities = 124/174 (71%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| |||||||||||||| || |||||| |||||| || || || |||| Sbjct 760 GACTCCTTCTGAATGTTGTAGTCCGACAGCGTACGCCCGTCCTCCAGCTGCTTGCCGGCG 819 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 | || || ||||| ||||| ||||| || || || ||||| ||| || || | Sbjct 820 AAAATAAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTGCTCTTGACG 879 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGA 138594 | || | ||||| | ||||| ||||||| ||| | || || ||||||||| Sbjct 880 TTGTCAATCGTGTCAGAGGACTCGACCTCGAGCGTAATGGTCTTGCCAGTCAGA 933 Score = 87.8 bits (96), Expect = 2e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| ||||||||||||||| | ||| ||| ||||||||| || || |||| Sbjct 1266 GACTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGCCCGTCCTCGAGCTGCTTGCCGGCG 1325 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTC 138521 |||| |||||||| ||||| ||||| || || || ||||| Sbjct 1326 AAGATAAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTC 1366 >seq2 Length=620658 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 ||||| || | ||| | ||| | || | | | |||||||| || ||||||||||| Sbjct 114249 CCGCCGCGAAGACGAAGAACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 114308 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||||||||| || || || | |||| || ||||| ||||| || || Sbjct 114309 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGGGGG 114368 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || || || ||||| ||| || || | | || | |||||| | ||||| ||| Sbjct 114369 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCCGAGGACTCGACC 114428 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| || | || || || || || || || || ||||||||||| Sbjct 114429 TCGAGAGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAAATCTGCAT 114475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496261283409600