Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20oleaginosus_20[genbank_20GCA_5F001027345.1_202 015-06-12] 180 sequences; 19,835,558 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq55 136 4e-27 seq119 122 8e-23 seq2 116 4e-21 seq14 104 2e-17 >seq55 Length=129735 Score = 136 bits (150), Expect = 4e-27 Identities = 299/447 (67%), Gaps = 21/447 (5%) Strand=Plus/Plus Query 47133 GCCGAACGTTTGATCGCTTTCGCCATCGTCGAGGGCGTCTTCTTCTCGGGCAGCTTTGCG 47192 ||||| || | ||||| ||||| |||||||||| |||||||||||||| || || Sbjct 78203 GCCGAGCGCCTCATCGCGTTCGCTGCCGTCGAGGGCATCTTCTTCTCGGGCTCGTTCGCC 78262 Query 47193 GCGATATTTTACATGAAAACCAAAGGAGTTATGCCCGGCCTCACGTTTAGCAACGAGCTA 47252 |||| || | | || | || |||||||||| || || || |||||||| Sbjct 78263 TCGATCTTCTGGCTCAAGAAGCGCGGCCTTATGCCCGGTCTTACCTTCTCGAACGAGCTT 78322 Query 47253 ATCTCGAGAGACGAAGGCCTGCACACCAACTTTGCCTGTCTCTACTACAAC-ACTAGAGT 47311 || ||| | ||||| ||||| |||||| |||| || || ||| || || | || | Sbjct 78323 ATTTCGCGCGACGAGGGCCTCCACACCGACTTCGCATGCCTCCTCTTCACCCACCTCCGC 78382 Query 47312 CGATCAAAAGTTGGACGTGCCCACCGTCAGC-----GACATGTT--TGC-CGAAGCCGTC 47363 || || |||||| | | || | | | | | ||| |||||| Sbjct 78383 CGC------------CGCCCCCACCCGGACCTTATTGAGAAGATCATCCGCGAGGCCGTC 78430 Query 47364 GCCATTGAGATGGAGTTTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATGAACGCG 47423 | || ||| |||||| || ||||||| || |||| || | | || |||||||| Sbjct 78431 GAGATCGAGCAGGAGTTCCTCACCGAGGCCCTTCCCGTCTCGCTTATCGGCATGAACGCC 78490 Query 47424 GAGATGATGAGAAAGTACATCGAATTTGTCGCCGACCGCCTGCTCGTTCAGCTAAAGTAT 47483 || | ||| | |||||||||| || |||||||||||||||||||| || | Sbjct 78491 AAGCTCATGTGCCAGTACATCGAGTTCGTCGCCGACCGCCTGCTCGTCGCCCTCGGCAAC 78550 Query 47484 CCCAAGATTTACCACACCGAGAATCCATTCGAGTTTATGAACAACATTTCGCTCGAGGGC 47543 |||||||| | || | || || ||||| || ||| | | || |||||| ||||| Sbjct 78551 CCCAAGATCTGGAACTCGACCAACCCCTTCGACTTCATGGAGATGATCTCGCTCCAGGGC 78610 Query 47544 AAGACCAACTTTTTCGAGAAGCGCGTC 47570 ||| ||||||| |||||| ||||||| Sbjct 78611 AAGGCCAACTTCTTCGAGTCGCGCGTC 78637 >seq119 Length=35684 Score = 122 bits (134), Expect = 8e-23 Identities = 148/199 (74%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 |||||||| || ||||| ||||| ||| | ||||| || || ||||| || ||| Sbjct 1035 GTAGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGCCCGTCCTCAAGCTGCTTGCCA 1094 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || |||| | |||||||| || || || ||||||||||||||| ||| || |||| Sbjct 1095 GCAAAGATGAGACGCTGCTGGTCAGGTGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTG 1154 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| |||| ||||| | |||||| || | ||| | ||| |||||||||||||| Sbjct 1155 ACGTTG-TCGATCGTGTCTGACGACTCGACCTCAAGGGTGATCGTCTTGCCGGTCAGAGT 1213 Query 127096 TTTTACAAAAATCTGCATG 127114 || || || ||||||||| Sbjct 1214 CTTGACGAAGATCTGCATG 1232 Score = 96.9 bits (106), Expect = 3e-15 Identities = 129/177 (73%), Gaps = 2/177 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || ||||| ||||| ||| | ||||| || || ||||| || || Sbjct 1263 GTGGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGCCCGTCCTCGAGCTGCTTGCCG 1322 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||| |||||||| ||||||||||||||| || || |||| Sbjct 1323 GCGAAGATAAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGAATCTTGGACTTG 1382 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAG 127092 | |||| |||| ||||||| |||||| || | ||| | || |||||||| || Sbjct 1383 ACGTTG-TCGATAGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCGGTGAG 1438 Score = 93.3 bits (102), Expect = 4e-14 Identities = 152/215 (71%), Gaps = 3/215 (1%) Strand=Plus/Plus Query 126880 TACTGCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTA 126939 |||||| || || || | || | ||| | || | ||| ||||| || ||||| ||||| Sbjct 721 TACTGC-CCGCCACGGAGACGGAGCACGAGGTGCAACGTCGACTCCTTCTGAATGTTGTA 779 Query 126940 ATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATC 126999 || || ||| || || || ||||| || || ||| | || | |||||||| || Sbjct 780 GTCCGACAGCGTACGCCCGTCCTCCAGCTGCTTGCCGGCGAAAATAAGGCGCTGCTGGTC 839 Query 127000 GGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTAC 127058 |||||| ||||||||||||||| ||| || ||||| |||| || | ||||| | Sbjct 840 GGGAGGGATGCCCTCCTTGTCCTGGATCTTGCTCTTGACGTTG-TCAATCGTGTCAGAGG 898 Query 127059 TCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGA 127093 |||||| |||| || | || ||||| |||||| Sbjct 899 ACTCGACCTCGAGCGTAATGGTCTTGCCAGTCAGA 933 >seq2 Length=620658 Score = 116 bits (128), Expect = 4e-21 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| || | ||||| || || ||||| || ||| Sbjct 114279 GTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCA 114338 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||| ||||| || ||||||||||||||| ||| ||| |||| Sbjct 114339 GCGAAGATGAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTCGACTTG 114398 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| |||| |||||||| |||||| |||| || | || ||||| || || || Sbjct 114399 ACGTTG-TCGATGGTGTCCGAGGACTCGACCTCGAGAGTGATGGTCTTGCCCGTGAGGGT 114457 Query 127096 TTTTACAAAAATCTGCAT 127113 || || ||||||||||| Sbjct 114458 CTTGACGAAAATCTGCAT 114475 >seq14 Length=296601 Score = 104 bits (114), Expect = 2e-17 Identities = 118/156 (76%), Gaps = 2/156 (1%) Strand=Plus/Plus Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||| || || ||| |||| | |||||||| ||||| || |||||||||||| Sbjct 201536 TCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTG 201595 Query 127019 TCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077 ||| ||| || ||||| |||| |||| ||||| | |||||| |||| ||| | Sbjct 201596 TCCTGGATCTTGGACTTGACGTTG-TCGATCGTGTCGGAGGACTCGACCTCGAGGGTGAT 201654 Query 127078 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || ||||| |||||||| || || || |||||||| Sbjct 201655 GGTCTTGCCCGTCAGAGTCTTGACGAAGATCTGCAT 201690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475499730123200