Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20oleaginosus_20[genbank_20GCA_5F001027345.1_202 015-06-12] 180 sequences; 19,835,558 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq54 163 3e-35 seq55 129 7e-25 seq5 105 8e-18 seq3 100 3e-16 >seq54 Length=131832 Score = 163 bits (180), Expect = 3e-35 Identities = 556/857 (65%), Gaps = 17/857 (2%) Strand=Plus/Plus Query 116425 GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATA 116484 || ||||| || || ||||| || ||||||| |||||| | | |||||| || Sbjct 61751 GGGAGGGCAATCGAGGCCAGGTTGCACACAGCAACCTCATCGGGAGACGAGTACTCGATG 61810 Query 116485 ATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 116544 || || || || | || || ||| |||||||| | || || || || ||||| | | Sbjct 61811 ATCTCGGTGCAGAGGTTGGACGACTTGATGGTGCCGAGGTGCTGCTGGTTCGACTTCGAG 61870 Query 116545 TTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA 116604 || ||| |||||||||||||| | || || ||||| || |||| || || || Sbjct 61871 TTGGCCGCGTCCTTGTAGAGCATGAAGGGACCGCCAGTCTCAGTCTGGGCCTCCAGGATG 61930 Query 116605 GCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTT 116663 || ||| | | || ||| || | | || | | | ||||| ||| ||||| Sbjct 61931 GCGAACCAGAGCTTCTGCGCCTTGATC-GTCTTGCGGCCCTTGCCCTCACGCTCATACTT 61989 Query 116664 TGTGTAGAGGGCCTCAAACTCTTCACCCACAGCC--TCTGAGAGCCCTGGTGCCTTATCT 116721 |||||| ||| ||||| || | | || || | || || || || | | Sbjct 61990 CTCGTAGAGCTGCTCGAACTCCTC--CGAGTGCACATCGGCAAGGCCGGGGCACTCAGCA 62047 Query 116722 GGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATC 116781 || || | ||| | ||| | || | ||| || ||||||||||||||||| |||||| Sbjct 62048 GGGCACATGAGGGTCCAGTCTCCGTCGGACTCGACGCGCTTCATGAAGAGGTCCGGGATC 62107 Query 116782 CAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCT--TCATCCCCCTGATTGAGACGCA 116839 ||||| || ||||||| || ||| ||| || ||| || | || || || || | Sbjct 62108 CAGAGAGCGTAGAAGAGGTCACGA--GCGCGCATCTCCTCCTTGCCGTGGTTCTTGCGGA 62165 Query 116840 ACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCT 116899 || | || || | | || ||||||||||| || ||||| | || | | || Sbjct 62166 GGTCAAGGAAATCAAACACGTCGGCGTGCCACGGCTCGAGGTAGATGGCAAAGGCGCCGG 62225 Query 116900 TGCGACGA---CCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTG 116956 ||| ||| |||||| || || | || || |||| | | || ||||| | Sbjct 62226 GGCGCTTGTTGCCACCCTGGTCAACGTAGCGGGCAGTCGCGTCGTAGGCACGGAGCATAG 62285 Query 116957 GAATGATACCATCAGATTGGCCATTTGTCCCCCGAAT--ACGAGACTTGTTGGCTCTGAC 117014 | | ||||| | || | ||| || || || ||| |||| | | |||| | | Sbjct 62286 GGACAATACCGTTCGAGTAGCCGTTGGTACCGGCAATGTACGAACCCT--TGGCGCGAAT 62343 Query 117015 ATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAG 117074 | ||||||||| | ||||||||| || || ||| ||||| || ||||| | |||| Sbjct 62344 GTTGTGGATGTGGAGACCAATACCACCGGCAGTCTTCGAGATCTGAGCGCAGGTCTTGAG 62403 Query 117075 ACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACAT 117134 | || |||| || || || || ||||| |||| | |||| |||||||| |||||| Sbjct 62404 AGTGTCGTAAATGCCGTCAATGGAGTCGTCCTTCATGGCGACAAGGAAGCACGACGACAT 62463 Query 117135 TTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTG 117194 || | || ||||| ||||||||||| || || | |||||| |||| | | Sbjct 62464 CTGCGCGTGGGGAGTACCGGCGTTGAAGAGAGTGGGCGACGCGTGAGTGAAGTAGCGCTC 62523 Query 117195 GGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGA 117254 |||||| | ||||||||| | ||| | || || || |||||||| |||| | Sbjct 62524 GGACATGAGGTTGTAGGTCTCGATGACGCGGTCAAGGTTCTCGCCGTGAATGCCGACAGC 62583 Query 117255 GACCCGCATAAACATGT 117271 || ||||| | ||||| Sbjct 62584 AACGCGCATGAGCATGT 62600 >seq55 Length=129735 Score = 129 bits (142), Expect = 7e-25 Identities = 346/524 (66%), Gaps = 4/524 (1%) Strand=Plus/Minus Query 127240 GACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCATAAAATCAAA 127299 ||| ||| |||||||||||| | ||| || | ||| ||| ||||||| || || || Sbjct 78637 GACGCGCGACTCGAAGAAGTTGGCCTTGCCCTGGAGCGAGATCATCTCCATGAAGTCGAA 78578 Query 127300 TGGGTTCTTTGAGTTCCAAATTGTTGGCACCCCAATCTGTTTGAGGAGACGATCCGAGAC 127359 ||||| | |||||||| || | || || | ||| || || || | ||| Sbjct 78577 GGGGTTGGTCGAGTTCCAGATCTTGGGGTTGCCGAGGGCGACGAGCAGGCGGTCGGCGAC 78518 Query 127360 GTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTACATGGGA-GCG 127418 | |||| ||||||| |||| || | |||||| ||||| || | | |||| | | Sbjct 78517 GAACTCGATGTACTGGCACATGAGCTTGGCGTTCATGCCGATAAGCG-AGACGGGAAGGG 78459 Query 127419 CGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGCGTGAATAGTGT 127478 | || || |||| ||| ||| || || || || || || | ||| | |||| || Sbjct 78458 CCTCGGTGAGGAACTCCTGCTCGATCTCGACGGCCTCGCGGATGATCTTCTCAATAAGGT 78399 Query 127479 CCACCCCAGGTCTATTGCGTAAAGTCTTGAAGAGTTCCACAGCAAACTCTTGGTGGAGAC 127538 || || | ||| | ||||||| || || || |||||| | Sbjct 78398 CCGGGTGGGGGCGGCGGCGGAGGTGGGTGAAGAGGAGGCATGCGAAGTCGGTGTGGAGGC 78339 Query 127539 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCT 127598 ||||||| || || || || || ||||||||| ||||| ||||| || || ||||||| Sbjct 78338 CCTCGTCGCGCGAAATAAGCTCGTTCGAGAAGGTAAGACCGGGCATAAGGCCGCGCTTCT 78279 Query 127599 TCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAACG 127658 | | |||||| |||| || ||||| ||||||||||| ||||| || ||||||| Sbjct 78278 TGAGCCAGAAGATCGAGGCGAACGAGCCCGAGAAGAAGATGCCCTCGACGGCAGCGAACG 78219 Query 127659 CAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCA-AACCACTTCATCGCCCACTGT 127717 | | || |||||||| || || || | | || | | ||| || |||||| | Sbjct 78218 CGATGAGGCGCTCGGCGAACGA-CGAGCTGTCGTCCGAGATCCAGCGCAGCGCCCAGTCG 78160 Query 127718 GCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGAG 127761 ||||| |||| ||| || |||| ||||| || || | ||||| Sbjct 78159 GCCTTCTTCTTGATGCAGGGGATGGTCTCAATGGCCTTGAAGAG 78116 >seq5 Length=484505 Score = 105 bits (116), Expect = 8e-18 Identities = 234/341 (69%), Gaps = 15/341 (4%) Strand=Plus/Plus Query 176593 CAACTTGAGGAGGGATGGCCAGAAGTAGTGGATCATATTGAGGATGAGACCCTTAATGTG 176652 || ||| |||||||| || ||||||||| || | |||| |||||||||||| || || Sbjct 152272 CATCTTCAGGAGGGAGGGGTAGAAGTAGTCGAGGAAGTTGATGATGAGACCCTTGATATG 152331 Query 176653 TGAACCATCGTTATCCGCATCCGTCATAATCATGAGCCGACCATAGCGAA-GCT-CGGAA 176710 ||||||||||| ||| || ||||| ||||||||| |||| ||||||| ||| || Sbjct 152332 TGAACCATCGTGGTCCTGGTCAGTCATGATCATGAGCTGACCGTAGCGAAGGCTGTCCAA 152391 Query 176711 ACATCTTGATAATCCTTACCTTGTTGAAGACCCAAAATCTTCTTGA-GATCATTGAA-CT 176768 | | | ||| | | | || | ||||||| |||| ||||| | || |||| || Sbjct 152392 AGAGGT--ATAGTTGTGATTGTGCTTCAGACCCAGGATCTGCTTGATGTTC--TGAATCT 152447 Query 176769 CTTGGTTTGATGTGAGTTG--CGCCACTGAAGCGTCGCGGACATTTTTACACTTCCCGCG 176826 | || ||| || || ||| || || |||||||| ||| ||||| Sbjct 152448 CGACATTCTTCATGATCTGCTCGTGGCTG--GCCTCACGGACATTGAGCAGCTTGCCGCG 152505 Query 176827 GAGAGGGAACACACCGTAGTGATCACGACCAACCA---CAGAGAGACCAGCAACTGCGAG 176883 ||||| || |||||| | | || || || | | || ||| || | || ||||| Sbjct 152506 AAGAGGAAAGACACCGAAATTGTCGCGCCCCCCGATGGCACCGAGGCCGGACACAGCGAG 152565 Query 176884 GGTCTTCGCGGAATCACCCTCCGTCACGATGAGCGTACACT 176924 | ||| ||||||||||| || || | |||||| ||||||| Sbjct 152566 TGCCTTGGCGGAATCACCTTCAGTGAGGATGAGGGTACACT 152606 >seq3 Length=604691 Score = 100 bits (110), Expect = 3e-16 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579 ||||| || ||| | ||||| ||||| |||||||| || || |||| ||| || Sbjct 403748 GCAAAGTCGGTGTGCATGCCCTCATCACGCGAGATGAGCTCGTTGCTGAAGGTCAGGCCG 403689 Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639 |||| || || |||||||| | |||||| || || |||||| |||||||||||||| Sbjct 403688 CGCATCAGCCCGCGCTTCTTGAGCCAGAAGATTGCTGCAAATGACCCAGAGAAGAAGATG 403629 Query 127640 CCCTCCACACACGCGAACGC 127659 ||||||||||| || || || Sbjct 403628 CCCTCCACACAAGCAAATGC 403609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613505819608800