Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20oleaginosus_20[genbank_20GCA_5F001027345.1_202 015-06-12] 180 sequences; 19,835,558 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq55 333 3e-86 seq2 143 3e-29 seq1 125 7e-24 seq119 122 9e-23 seq3 102 8e-17 >seq55 Length=129735 Score = 333 bits (368), Expect = 3e-86 Identities = 549/786 (70%), Gaps = 21/786 (3%) Strand=Plus/Minus Query 132666 CATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGG---TGCCGATCAGGTCGACGAG 132722 ||| || || |||||||||| | ||| || ||||| |||||| || ||||||| Sbjct 78589 CATGAAGTCGAAGGGGTTGGTCGAGTTCCAGATCTTGGGGTTGCCGA---GGGCGACGAG 78533 Query 132723 CAGCCTGTCGGCCACGAACTCGATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCA 132781 ||| | |||||| |||||||||||||| || ||||| | || || | | | || | | Sbjct 78532 CAGGCGGTCGGCGACGAACTCGATGTACTGGCACATGAGCTTGGCGTTCATG-CCGATAA 78474 Query 132782 GACGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGA 132841 | || || || || |||||||| || |||||||| |||| || ||| || || Sbjct 78473 GCGAGACGGGAAGGGCCTCGGTGAGGAACTCCTGCTCGATCTCGACGGCCTCGCGGATGA 78414 Query 132842 TTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAA 132901 | | | || | ||| | || || | | || |||| | | ||| || | Sbjct 78413 TCTTCTCAATAAGGTCCGGGTGGGGGCGGCGGCGGAGGTGGGTGAAGAGGAGGCATGCGA 78354 Query 132902 AGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCA 132961 ||||| || | ||||||||| | ||||| || ||||| ||| || | ||||||| Sbjct 78353 AGTCGGTGTGGAGGCCCTCGTCGCGCGAAATAAGCTCGTTCGAGAAGGTAAGACCGGGCA 78294 Query 132962 TGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCT 133021 | |||||||| || |||||||| || || | |||||| |||||| ||||||| ||||| Sbjct 78293 TAAGGCCGCGCTTCTTGAGCCAGAAGATCGAGGCGAACGAGCCCGAGAAGAAGATGCCCT 78234 Query 133022 CGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGC 133081 ||||||| ||||| || | ||||||||| |||||| | | | | |||||||| Sbjct 78233 CGACGGCAGCGAACGCGATGAGGCGCTCGGCGAACGACGAGCTGTCGTCCGAGATCCAGC 78174 Query 133082 GCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAAC 133141 |||||||||| |||||||| | |||| ||| || || || || ||||| || | | | Sbjct 78173 GCAGCGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCAATGGCCTTGA--AGAG 78116 Query 133142 GGAGTTTCTCTTCCGAGGA-----ACGCACGTAGGTGTCGATGAGGGTCGAATACATTTC 133196 | |||| | || | | ||| | ||||||||||||||| || || | || Sbjct 78115 GTAGTTGC---GGCGGGCACCGTCACGGATGTAGGTGTCGATGAGAAGAGAGTAGGTCTC 78059 Query 133197 CGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTG 133256 ||||| | ||||||||| ||| || |||||||| ||| | |||||| | | ||| Sbjct 78058 AGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGGTCTTGGCCTCGGCGATCTG 77999 Query 133257 CACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAA 133316 || || ||| |||||||| || || ||||||||||||||||| |||||||| Sbjct 77998 GACCTCACCGCAGAAGCGCTCGACAAGGTTCTCGTTGACGATGCCGTCTGACGCGGCGAA 77939 Query 133317 AAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTT---CAAGCGCTCCCAGTC 133373 ||||| |||||||||| |||||| | ||||||||||||||| | | |||||||| Sbjct 77938 GAAGGCGAGCACGTGCTCGATGAAGTAGCGCTCGTTGTCGTTGAGCTTGTTGTCCCAGTC 77879 Query 133374 GCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTT 133433 | | ||| | |||| | ||||||| ||||||| || ||||||| || || || Sbjct 77878 GTGGAGGTCGGGCGCGAGGTTGATCTCCTCGGCGGTCCAGAAGGACGCCTGCGCCTTCTT 77819 Query 133434 GTACAT 133439 |||||| Sbjct 77818 GTACAT 77813 >seq2 Length=620658 Score = 143 bits (158), Expect = 3e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||||||||| |||||||| |||| |||||| || | Sbjct 114475 ATGCAGATTTTCGTCAAGACCCTCACGGGCAAGACCATCACTCTCGAGGTCGAGTCCTCG 114416 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || || |||| ||||| ||||| || ||| ||||||| Sbjct 114415 GACACCATCGACAACG-TCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCA 114357 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||| | ||| ||||| ||||| || |||| |||||||| |||||||| Sbjct 114356 GCAGCGCCTCATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAA 114297 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| ||||| |||| || || | || || ||| | | ||||| Sbjct 114296 CATCCAGAAGGAGTCGACCCTCCACCTCGTTCTTCGTCTTCGCGGCGG 114249 >seq1 Length=646641 Score = 125 bits (138), Expect = 7e-24 Identities = 185/259 (71%), Gaps = 5/259 (2%) Strand=Plus/Minus Query 107544 CCCAGATCGTCCCTGTCCGTGTGCACGACCAGACTCCGTCCGATGATGCTGTGCGGGCCG 107603 ||||| |||||| || || ||||||||| | || || || || | ||||||| | ||| Sbjct 136715 CCCAGGTCGTCCGTGCCCTCGTGCACGACGACACCACGCCCAATTACGCTGTGCTGCCCG 136656 Query 107604 TACAAAGTCACGACGCCGTCCGTCAAGCTCACCTCGGTGAGCGCGTCGCGGCCCGCCGAC 107663 ||| ||||| || |||| | | | || || || |||| | ||||| Sbjct 136655 CACAGGCGCACGAGGCAGTCCTTGATTTCGATCTTGGCGACGCCGTCCGCGTCCGCC--- 136599 Query 107664 TTGAGGTTGCCCAGGTCGCCGACGTGCCTGATCTCGGCGTCGGGCGCGCCGTGGTCGCGC 107723 |||| ||| || ||||| || ||||||| | ||| | || || |||||||| ||| | Sbjct 136598 TTGATGTTACCGAGGTCACCCACGTGCCGGTTCTTGTCGGACGGGGCGCCGTGATCGTG- 136540 Query 107724 TTCGTC-GGGTTGAAATGCTCGCCGGCCGACGTGCAGCCGTTGCTCGCGTCGCCGAACTC 107782 | || |||||| | ||| |||| | ||| |||| |||| ||| |||||||||||| Sbjct 136539 TCCGAAAGGGTTGTAGTGCGCGCCTGTGGACATGCACCCGTCGCTGAGGTCGCCGAACTC 136480 Query 107783 GTGCACGTGGAAGCCGTGC 107801 ||||||||||||||||||| Sbjct 136479 GTGCACGTGGAAGCCGTGC 136461 Score = 93.3 bits (102), Expect = 4e-14 Identities = 104/139 (75%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 107669 GTTGCCCAGGTCGCCGACGTGCCTGATCTCGGCGTCGGGCGCGCCGTGGTCGCGCTTCGT 107728 |||||||| |||||| | ||| | | | | | ||||| |||||||||| || ||| Sbjct 190242 GTTGCCCATGTCGCCCATGTGACGGTTGCGGTCTTCGGGTGCGCCGTGGTTCCGGTTCAG 190183 Query 107729 CGGGTTGAAATGCTCGCCGGCCGACGTGCAGCCGTTGCTCGCGTCGCCGAACTCGTGCAC 107788 |||||| | ||| | || | ||| |||| || | |||| ||||||||||| ||| || Sbjct 190182 CGGGTTCCAGTGCACCCCCGTCGAGTTGCATCCCTGGCTCAGGTCGCCGAACTGGTGTAC 190123 Query 107789 GTGGAAGCCGTGCAGGCCG 107807 ||| | ||||||||||||| Sbjct 190122 GTGCATGCCGTGCAGGCCG 190104 >seq119 Length=35684 Score = 122 bits (134), Expect = 9e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || ||||| || |||||| | || |||||| | | Sbjct 1231 ATGCAGATCTTCGTCAAGACTCTGACCGGCAAGACGATCACCCTTGAGGTCGAGTCGTCA 1172 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| || | | | | |||| || |||| ||||| ||||| ||||| | ||||| Sbjct 1171 GACA-CGATCGACAACGTCAAGAGCAAGATCCAGGACAAGGAGGGCATTCCACCTGACCA 1113 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||| | || ||||| ||||| || |||| |||||| ||| ||||||||| Sbjct 1112 GCAGCGTCTCATCTTTGCTGGCAAGCAGCTTGAGGACGGGCGCACTCTCTCCGACTACAA 1053 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||| || ||||| | || || || | || |||||| | | |||||| Sbjct 1052 CATTCAGAAGGAGTCTACCCTCCACCTCGTTCTGCGTCTCCGCGGCGGC 1004 Score = 118 bits (130), Expect = 1e-21 Identities = 153/208 (74%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 38265 CTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACA-GCGTGCAAACGCTTAA 38323 || || ||||| ||||| || |||| |||||| || | |||| | || |||| | | Sbjct 932 CTGACTGGCAAGACCATTACGCTCGAGGTCGAGTCCTCTGACACGATTGACAACG--TCA 875 Query 38324 AGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGG 38382 ||| || |||| ||||| ||||| || || ||||||| ||||| || |||| ||| | Sbjct 874 AGAGCAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGCCTTATTTTCGCCG 815 Query 38383 GCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGC 38442 |||| |||||||| |||| ||| || || ||||||||||| || ||||| ||||| Sbjct 814 GCAAGCAGCTGGAGGACGGGCGTACGCTGTCGGACTACAACATTCAGAAGGAGTCGACGT 755 Query 38443 TGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||| | ||||| ||| | | ||||| Sbjct 754 TGCACCTCGTGCTCCGTCTCCGTGGCGG 727 Score = 107 bits (118), Expect = 2e-18 Identities = 150/208 (72%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 38265 CTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAA 38323 ||||| ||||| ||||||||| | || |||||| || | |||| | | |||| | || Sbjct 1438 CTCACCGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACTATCGACAACG-TCAA 1380 Query 38324 AGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGG 38383 || || | ||||| ||||| || || ||||||| ||||| || || | ||| || Sbjct 1379 GTCCAAGATTCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGTCTTATCTTCGCCGG 1320 Query 38384 CAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCT 38443 ||| ||||| || |||| |||||| ||| |||||||||||| || ||||| | || || Sbjct 1319 CAAGCAGCTCGAGGACGGGCGCACTCTCTCCGACTACAACATTCAGAAGGAGTCCACTCT 1260 Query 38444 GCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 || | || || ||| | | |||||| Sbjct 1259 CCACCTTGTCCTTCGTCTTCGTGGCGGC 1232 >seq3 Length=604691 Score = 102 bits (112), Expect = 8e-17 Identities = 149/208 (72%), Gaps = 7/208 (3%) Strand=Plus/Minus Query 132895 CAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAG 132954 || ||||||||| |||| |||||| || | || ||||| ||||||||||| |||| | Sbjct 403751 CATGCAAAGTCGGTGTGCATGCCCTCATCACGCGAGATGAGCTCGTTGCTGAAGGTCAGG 403692 Query 132955 CCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAG 133014 ||| |||| || ||||| || |||||||| || || || || || || || |||||| Sbjct 403691 CCGCGCATCAGCCCGCGCTTCTTGAGCCAGAAGATTGCTGCAAATGACCCAGAGAAGAAG 403632 Query 133015 ACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGC- 133073 | |||||| || || || || | |||||| || |||| ||| ||| | ||| Sbjct 403631 ATGCCCTCCACACAAGCAAATGCGATGAGGCGCGTGCGGAAC--GGCATCT---CAGGCG 403577 Query 133074 -GATCCAGCGCAGCGCCCATTCGGCCTT 133100 ||| | |||||||| |||||||| Sbjct 403576 TGATATACTTGAGCGCCCAGTCGGCCTT 403549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500171674611200