Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20oleaginosus_20[genbank_20GCA_5F001027345.1_202 015-06-12] 180 sequences; 19,835,558 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq54 149 8e-31 seq55 113 6e-20 seq3 113 6e-20 seq94 87.8 2e-12 seq5 86.0 8e-12 >seq54 Length=131832 Score = 149 bits (164), Expect = 8e-31 Identities = 361/540 (67%), Gaps = 19/540 (4%) Strand=Plus/Minus Query 111611 CCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGT 111670 ||| ||| ||||| ||||||| || || |||| || || || || | |||| || Sbjct 62608 CCCGCAGCACATGCTCATGCGCGTTGCTGTCGGCATTCACGGCGAGAACCTTGACCGCGT 62549 Query 111671 TTTGGAGACATACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAACCCTCT 111729 | ||||| ||| || |||||| | | || |||| ||||| | || || |||| Sbjct 62548 CATCGAGACCTACAACCTCATGTCCGAGCGCTAC-TTCACTCACGCGTCGCCCACTCTCT 62490 Query 111730 TCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGG 111789 ||||||| ||||| || | || ||||| || |||||| | || | ||||| | Sbjct 62489 TCAACGCCGGTACTCCCCACGCGCAGATGTCGTCGTGCTTCCTTGTCGCCATGAAGGACG 62430 Query 111790 ATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTG 111849 | || || | |||||||||| |||||||| || || || ||||| ||| || | Sbjct 62429 ACTCCATTGACGGCATTTACGACACTCTCAAGACCTGCGCTCAGATCTCGAAGACTGCCG 62370 Query 111850 GTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGT--ATTAGAGGTAC 111907 ||||||| || | |||||||| | | | |||| | | |||| ||| ||||| Sbjct 62369 GTGGTATTGGTCTCCACATCCACAACATTCGCGCCA--AGGGTTCGTACATTGCCGGTAC 62312 Query 111908 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 111967 || || | || | |||||| | || ||||| || | | |||| || || ||||| Sbjct 62311 CAACGGCTACTCGAACGGTATTGTCCCTATGCTCCGTGCCTACGACGCGACTGCCCGCTA 62252 Query 111968 TGTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATG 112021 || |||| | ||| ||| | | || | | || |||| || ||||| || Sbjct 62251 CGTTGACCAGGGTGGCAACAAGCGCCCC---GGCGCCTTTGCCATCTACCTCGAGCCGTG 62195 Query 112022 GCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAG--GCG 112079 |||||| || | | || |||||||| | || ||||| || | |||||| ||| Sbjct 62194 GCACGCCGACGTGTTTGATTTCCTTGACCTCCGCAAGAACCACGGCAAGGAGGAGATGCG 62135 Query 112080 CGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAG 112139 || | || || ||||||| |||||||||||| || || |||||||||||| | || ||| Sbjct 62134 CGCT--CGTGACCTCTTCTACGCTCTCTGGATCCCGGACCTCTTCATGAAGCGCGTCGAG 62077 >seq55 Length=129735 Score = 113 bits (124), Expect = 6e-20 Identities = 115/150 (77%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 102171 TCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCC 102230 || || || ||||| ||| |||| || || || ||||| ||||||||||| || || Sbjct 78197 TCGTTCGCCGAGCGCCTCATCGCGTTCGCTGCCGTCGAGGGCATCTTCTTCTCGGGCTCG 78256 Query 102231 TTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 102290 ||| | | || | |||||||||||||| || || ||||| ||||| |||||| ||| Sbjct 78257 TTCGCCTCGATCTTCTGGCTCAAGAAGCGCGGCCTTATGCCCGGTCTTACCTTCTCGAAC 78316 Query 102291 GAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 |||||||| || || |||||||| |||||| Sbjct 78317 GAGCTTATTTCGCGCGACGAGGGCCTCCAC 78346 >seq3 Length=604691 Score = 113 bits (124), Expect = 6e-20 Identities = 117/151 (77%), Gaps = 2/151 (1%) Strand=Plus/Plus Query 102182 GCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGC-GCTA 102240 ||| ||| |||||||||| ||||| ||||| |||||||||||||| || || ||| || | Sbjct 403599 GCGCCTCATCGCATTTGCTTGTGTGGAGGGCATCTTCTTCTCTGGGTCATT-TGCAGCAA 403657 Query 102241 TTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCT 102300 | | |||||||||||||| || || |||| || || |||| ||||||||| |||| Sbjct 403658 TCTTCTGGCTCAAGAAGCGCGGGCTGATGCGCGGCCTGACCTTCAGCAACGAGCTCATCT 403717 Query 102301 CTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 | ||||| ||||| | ||| || ||||| Sbjct 403718 CGCGTGATGAGGGCATGCACACCGACTTTGC 403748 >seq94 Length=67100 Score = 87.8 bits (96), Expect = 2e-12 Identities = 157/229 (69%), Gaps = 8/229 (3%) Strand=Plus/Plus Query 16065 GCATCAATCTCATCAATGAAGACGATGCATGG----TTGATTTTCGCGAGCGACTTCAAA 16120 || || ||||| ||||||||||| ||| ||| || | || || | | | || Sbjct 55610 GCGTCGATCTCGTCAATGAAGACAATGGCTGGGGCGTTCTTCTTGGCCTGGG----CGAA 55665 Query 16121 GAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA 16180 ||| || || |||||| || || ||||| || |||||||| ||||| | | | || Sbjct 55666 GAGGTCACGCACACGCGAGGGACCGACACCGACGAACATCTCGACAAACTCGGAACCCGA 55725 Query 16181 ACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACC 16240 || |||||| || |||| ||||| || |||| ||| || ||||||||||| Sbjct 55726 GACGGAGAAGAAGGGCACCTTAGCCTCACCAGCGGTGGCCTTGGCAAGGAGAGTCTTACC 55785 Query 16241 CGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCA 16289 ||||| || |||| ||| | |||||| || || |||||||| ||| Sbjct 55786 GGTACCAGGAGGTCCCGAGAGAATGGCACCACGGGGGATCTTGGCACCA 55834 >seq5 Length=484505 Score = 86.0 bits (94), Expect = 8e-12 Identities = 213/322 (66%), Gaps = 6/322 (2%) Strand=Plus/Plus Query 176017 CGCATCCTTACCACC---CATGAGACGCGTACCAAACTGACCACACGGCTCAAGAAGATT 176073 ||| ||||| || || |||| || |||||||||||||| |||||||||||||| Sbjct 151570 CGCGTCCTTGCCGCCTTGCATGCGA---GTACCAAACTGACCGTTGGGCTCAAGAAGATT 151626 Query 176074 GATATTGTTTGAACCCATGTAGTCATTCGCCAACTTGACAATCGTGTCCGCGAGAGAGAC 176133 ||| ||||| || | ||| | ||| | |||||| || ||| | | Sbjct 151627 GATGTTGTTGCTGCCGACAAAGTTCTGCGCAAGACCGACAATGGTCGCCGTCAAACTCTG 151686 Query 176134 TTCACCGTGGTGGTACGCACTCTTCTCTGCGACAAATGCCGCCAACTGCGCCACTTTCAT 176193 ||| |||||||| ||||| ||||| ||||| | | | | || | || || || Sbjct 151687 TTCGCCGTGGTGATACGCCGAATTCTCGGCGACGTAACCACCGAGTTGAACAACCTTGAT 151746 Query 176194 CTCATCCTTGAGATTCTTGTGGAAACATGCGTACATAACCTTGCGTTGCGAAGGCTTGAG 176253 || |||| ||||| | || || || |||| |||||||| || || ||||| Sbjct 151747 TTCGCCCTTCAGATTGCGCTTAAAGCAACCGAACATGACCTTGCGCTGACCCGGTTTGAG 151806 Query 176254 ACCATCCGCCATGTGTGCGATAGAACGCTTCAAGTCCGCCAAACTGAAGTTGACGAGGTC 176313 ||||||||| | || ||| || || | |||||||| |||| || ||| || Sbjct 151807 ACCATCCGCAACTGATGGGATCGATCGTATGTTGTCCGCCATGGAGAAGAGGATGAGTTC 151866 Query 176314 CTTGTGTACAAAGTTTGAGATG 176335 ||||| ||||||| |||||| Sbjct 151867 CTTGTTGACAAAGTCCGAGATG 151888 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620741003329600