Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20oleaginosus_20[genbank_20GCA_5F001027345.1_202 015-06-12] 180 sequences; 19,835,558 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq54 196 6e-45 seq94 163 3e-35 seq3 89.7 6e-13 >seq54 Length=131832 Score = 196 bits (216), Expect = 6e-45 Identities = 678/1045 (65%), Gaps = 41/1045 (4%) Strand=Plus/Plus Query 110103 ATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGC 110162 ||| || || ||||| ||||| ||||| | |||||| || |||||| ||| || || Sbjct 61573 ATCGGCGAGGCCCTGGACACCAAGACCGACGGGGCGGTGACGCATGTTGGAGTTGCGCGC 61632 Query 110163 AGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTT 110222 |||||||| |||||||| ||||||| | | ||| ||||| || || | | Sbjct 61633 CTCAATGACGGGGTAGTAGTTGCGGGTGATGACCTGGTCGAGGTTCTTAGTGACGACCCT 61692 Query 110223 CGTGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTATTGACATATTTGGG 110282 ||||| || || | || | | | ||| | || | | ||| | ||| | || Sbjct 61693 GGTGATGTCGTGCAACTTCTGGAAGTCGTAGGTCTGCCCCTCAAGGTCAACAAAGGCCGG 61752 Query 110283 GAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAAT 110342 ||| ||||| || || || |||||||||| | ||| || | ||| || | || Sbjct 61753 GAGGGCAATCGAGGCCAGGTTGCACACAGCAACCTCATCGGGAGACGAGTACTCGATGAT 61812 Query 110343 TTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTT 110402 || || || | |||||| ||| ||| || | || || ||| ||||| || ||||| Sbjct 61813 CTCGGTGCAGAGGTTGGACGACTTGATGGTGCCGAGGTGCTGCTGGTTCGACTTCGAGTT 61872 Query 110403 GCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGC 110462 | || ||||| ||||||||| | || ||||| || ||||| | || || ||||| Sbjct 61873 GGCCGCGTCCTTGTAGAGCATGAAGGGACCGCCAGTCTCAGTCTGGGCCTCCAGGATGGC 61932 Query 110463 CTTCCATA-CATCGGCGGCGGGGACAGTTG--CGT-TAGCGAGACCTT--CCTC---CTC 110513 ||| | | || ||| | ||| ||| | ||| | |||| |||| ||| Sbjct 61933 GAACCAGAGCTTCTGCGCC--------TTGATCGTCTTGCG-GCCCTTGCCCTCACGCTC 61983 Query 110514 GTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTT 110573 ||||| ||| | | ||| || |||| || |||||| | ||| || || Sbjct 61984 ATACTTCTCGTAGAGCTGCTCGAACTCCTCCGAGTGCACATCGGCAAGGCCGGGGCACTC 62043 Query 110574 GTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGG 110633 | || || | ||||| ||| | ||| | ||| || | ||||||||| ||||| || Sbjct 62044 AGCAGGGCACATGAGGGTCCAGTCTCCGTCGGACTCGACGCGCTTCATGAAGAGGTCCGG 62103 Query 110634 AATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCT--TCATCACCTTGGTTGAGG 110691 ||||| | || |||| |||||||| | || || ||| || | || ||||| | Sbjct 62104 GATCCAGAGAGCGTAGAAGAGGTCACG--AGCGCGCATCTCCTCCTTGCCGTGGTTCTTG 62161 Query 110692 CGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGAT 110751 || || || | || || | | || | |||||| || ||||| |||| || | || Sbjct 62162 CGGAGGTCAAGGAAATCAAACACGTCGGCGTGCCACGGCTCGAGGTAGATGGCAAAGGCG 62221 Query 110752 CC------CTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTG 110805 || ||| | |||| |||| ||| ||||| || || || | | || | | | Sbjct 62222 CCGGGGCGCTTGTTGCCACCC---TGGTCAACGTAGCGGGCAGTCGCGTCGTAGGCACGG 62278 Query 110806 AGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCA 110865 |||||||| | ||| || | || | || || ||||| ||| || ||||| Sbjct 62279 AGCATAGGGACAATACCGTTCGAGTAGCCGTTGGTACCGGCAATGTACGAACCCTTGGCG 62338 Query 110866 CGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACA-CTC 110924 ||||||| |||||| || | |||||||||||| || ||| || || || || || Sbjct 62339 CGAATGTTGTGGATGTGGAGACCAATACCACCGGCAGTCTTCGAGATCTGAGCGCAGGTC 62398 Query 110925 TGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGA 110984 | |||| || | ||||| || ||||| || || |||| |||| | || ||||| || Sbjct 62399 T-TGAGAGTGTCGTAAATGCCGTCAATGGAGTCGTCCTTCATGGCGACAAGGAAGCACGA 62457 Query 110985 AGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAG 111044 |||||||| | | || || || || |||||||| || || | ||| ||| |||| Sbjct 62458 CGACATCTGCGCGTGGGGAGTACCGGCGTTGAAGAGAGTGGGCGACGCGTGAGTGAAGTA 62517 Query 111045 ACCTTGGGACATCTTGTTGTATGTGTCGA--GTGCGG--AGGGTACATCTTTACCGTGAA 111100 | | |||||| |||||| || |||| |||| | ||| | | ||||||| Sbjct 62518 GCGCTCGGACATGAGGTTGTAGGTCTCGATGACGCGGTCAAGGTTC----TCGCCGTGAA 62573 Query 111101 TACCAATGGCAACTCGCATGAACAT 111125 | || | ||||| ||||||| ||| Sbjct 62574 TGCCGACAGCAACGCGCATGAGCAT 62598 >seq94 Length=67100 Score = 163 bits (180), Expect = 3e-35 Identities = 348/511 (68%), Gaps = 23/511 (5%) Strand=Plus/Plus Query 11503 CGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCG 11562 || || ||||| || || || | || || ||||| | ||| | ||||| ||| || Sbjct 55427 CGGTCAAAACGGCCGGGACGCATCAGGGCGGGGTCAAGGACGTCGGCGCGGTTGGTACCG 55486 Query 11563 GCAATGACTACAATGCCAGTCTCATTGTCGAAACCGTCCATTTCTGTGAGAAGCTGGTTG 11622 |||| || |||||| || || |||| |||||||| || || ||||||||| Sbjct 55487 GCAAGCACAACAATGTGCTCCTTGGTGCCGAAGCCGTCCATCTCCACAAGGAGCTGGTTG 55546 Query 11623 ATCGTCTGTTCACGCTCATCGTTGGAGGGCATA----CCACC--TGCCGAACGCTTCTTA 11676 | ||| |||||||| |||||| | || | || || |||| ||| ||| Sbjct 55547 AGGGTCGACTCACGCTCGTCGTTGCCGC-CAAAGTGGCCGCCCTTGCC--ACGGGCCTTG 55603 Query 11677 CCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGT----GCCTG 11732 || | |||||| ||||| || ||||| || || || ||| | | | ||||| Sbjct 55604 CCAATAGCGTCGATCTCGTCAATGAAGACAAT----GGCTGGGGCGTTCTTCTTGGCCTG 55659 Query 11733 TTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGC 11792 |||| || ||||| |||||| | || ||||| ||||||||||| || || | | Sbjct 55660 GGCGAAGAGGTCACGCACACGCGAGGGACCGACACCGACGAACATCTCGACAAACTCGGA 55719 Query 11793 GGCAGAACACTGA-ATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAG 11851 | || || || | |||||| || |||| |||||||||| |||| || ||||||| Sbjct 55720 ACCCGAG-ACGGAGAAGAAGGGCACCTTAGCCTCACCAGCGGTGGCCTTGGCAAGGAGAG 55778 Query 11852 TCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCA--CT 11909 ||||||| |||||||| | || | ||||| ||| ||||||||||||||||||||| || Sbjct 55779 TCTTACCGGTACCAGGAGGTCCCGAGAGAATGGCACCACGGGGGATCTTGGCACCAAGCT 55838 Query 11910 TCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGC 11969 | ||| | |||| ||| ||||| | |||| |||| | ||||||||||| Sbjct 55839 T--TTCGTACTTTCCTGGCTCCTTAAGGAACTTGACAAACTCCATGATCTCCTCCTTGGC 55896 Query 11970 GGAGTCGATACCCTCAACATCGGTGAAACGA 12000 ||| ||||| | || ||| ||| ||| Sbjct 55897 CTCGTCCATACCAGCGACGTCGCGGAAGCGA 55927 >seq3 Length=604691 Score = 89.7 bits (98), Expect = 6e-13 Identities = 99/132 (75%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 119514 CCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCTCTTTTC 119573 || ||||| || ||||||||||| || |||||| || || |||| || || | ||| Sbjct 403730 CCCTCATCACGCGAGATGAGCTCGTTGCTGAAGGTCAGGCCGCGCATCAGCCCGCGCTTC 403671 Query 119574 TTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAGGCGAAA 119633 || ||||| ||||| || ||| ||||| |||||||||||||||||||| || || Sbjct 403670 TTGAGCCAGAAGATTGCTGCAAATGACCCAGAGAAGAAGATGCCCTCCACACAAGCAAAT 403611 Query 119634 GCGAATAGACGC 119645 |||| || ||| Sbjct 403610 GCGATGAGGCGC 403599 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588974674804000