Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20oleaginosus_20[genbank_20GCA_5F001027345.1_202 015-06-12] 180 sequences; 19,835,558 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq14 102 5e-17 seq2 102 5e-17 seq119 87.8 1e-12 >seq14 Length=296601 Score = 102 bits (112), Expect = 5e-17 Identities = 128/176 (73%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 34806 TAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGG 34865 |||||||||||| | || | || || ||||| || ||||| || || || || |||||| Sbjct 201515 TAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGG 201574 Query 34866 TCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCG 34925 || | || | ||||||||||| ||||| |||||| | |||| || | Sbjct 201575 TCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATCGTGTCGGAG 201634 Query 34926 GCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | ||| || |||| ||| ||||| || ||||| |||||||| || ||||||||||| Sbjct 201635 GACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGAGTCTTGACGAAGATCTGCAT 201690 >seq2 Length=620658 Score = 102 bits (112), Expect = 5e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| |||||||||||| | || | || || ||||| || || || || Sbjct 114285 TCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAG 114344 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| |||||| |||||| Sbjct 114345 ATGAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTG 114404 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || || ||| || |||| || ||||| || |||||||| ||||| || Sbjct 114405 TCGATGGTGTCCGAGGACTCGACCTCGAGAGTGATGGTCTTGCCCGTGAGGGTCTTGACG 114464 Query 34971 AAGATCTGCAT 34981 || |||||||| Sbjct 114465 AAAATCTGCAT 114475 >seq119 Length=35684 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||||||||| ||||| || || | || | || || ||||| || || ||||| Sbjct 1041 TCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGCCCGTCCTCAAGCTGCTTGCCAGCAAAG 1100 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| ||||| |||||| Sbjct 1101 ATGAGACGCTGCTGGTCAGGTGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGACGTTG 1160 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| || | ||| || || | ||| || || || || || |||||||| || Sbjct 1161 TCGATCGTGTCTGACGACTCGACCTCAAGGGTGATCGTCTTGCCGGTCAGAGTCTTGACG 1220 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 1221 AAGATCTGCAT 1231 Score = 84.2 bits (92), Expect = 1e-11 Identities = 121/171 (71%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||||||||| |||||||| || | || | || |||||||| || ||||| || Sbjct 763 TCCTTCTGAATGTTGTAGTCCGACAGCGTACGCCCGTCCTCCAGCTGCTTGCCGGCGAAA 822 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | ||||||||||| ||||| |||||| Sbjct 823 ATAAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTGCTCTTGACGTTG 882 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGA 34961 | |||| ||| || ||| || |||| || ||||| || || || ||| Sbjct 883 TCAATCGTGTCAGAGGACTCGACCTCGAGCGTAATGGTCTTGCCAGTCAGA 933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324632887835040