Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20oleaginosus_20[genbank_20GCA_5F001027345.1_202 015-06-12] 180 sequences; 19,835,558 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq54 347 2e-90 seq55 179 7e-40 seq3 116 7e-21 >seq54 Length=131832 Score = 347 bits (384), Expect = 2e-90 Identities = 956/1449 (66%), Gaps = 31/1449 (2%) Strand=Plus/Plus Query 221406 CGCAAGACTGCGTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCT 221465 |||| ||| || ||||| ||||||||||||||||| || ||| || |||||| ||| Sbjct 61470 CGCACGACGCAGTGAGGGCGGCGTGGTAGATGGTCTCGAAAATCTTCAGGTTGAG-CTCA 61528 Query 221466 TG-GCCTCGGGAGAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGT 221524 | ||||||||||| ||||||||| || || | ||| ||||| || ||||| Sbjct 61529 CGAGCCTCGGGAGAGTCGAAGGGCATGCGGAGAGCCATGAAGGTATCGGCGAGGCCCTGG 61588 Query 221525 ACTCCGATACCGATGGGCCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAA 221584 || || | ||||| ||| | ||| | | ||||||| | ||| || ||||| || Sbjct 61589 ACACCAAGACCGACGGGGCGGTGACGCATGTTGGAGTTGCGCGCCTCAATGACGGGGTAG 61648 Query 221585 AAGTTGACGTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGC 221644 ||||| | ||| | | || ||||||| ||||| ||| | | ||| || | Sbjct 61649 TAGTTGCGGGTGATGACCTGGTCGAGGTTCTTAGTGACGACCCTGGTGATGTCGTGCAAC 61708 Query 221645 TTCTGGTGATTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGG 221704 |||||| | | | | | || || || || ||||| || ||| Sbjct 61709 TTCTGGAAGTCGTAGGTCTGC------CCCTCAAGG------TCAACAAAGGCCGGGAGG 61756 Query 221705 GCAACGCTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCT 221764 |||| ||||||||| ||||| || ||||| || | |||| |||||||| Sbjct 61757 GCAATCGAGGCCAGGTTGCACACAGCAACCTCATCGGGAGACGAGTACTCGATGATCTCG 61816 Query 221765 GTACAGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGA-TTGGC 221823 || ||||||||| |||||||||| || ||||| | || || ||||| ||| ||||| Sbjct 61817 GTGCAGAGGTTGGACGACTTGATGGTGCCGAGGTGCTGCTGGTTCGACTT-CGAGTTGGC 61875 Query 221824 AGCGTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTC 221883 ||||||||||||||||| ||||||||||||||||| ||| ||| |||| || | Sbjct 61876 CGCGTCCTTGTAGAGCATGAAGGGACCGCCAGTCTCAGTCTGGGCCTCCAGGATGGCGAA 61935 Query 221884 CCAGAGTTCTCTG-GCGCTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGG 221942 |||||| | |||| || | | |||| | | | ||||| || | | | || Sbjct 61936 CCAGAGCT-TCTGCGCCTTGATCGTCTTGCGGCCCTTGCCCTCACGCTCATACTTCTCG- 61993 Query 221943 TATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGAC 222002 |||||| || |||| || || | | ||| | ||||| || ||| || || | Sbjct 61994 --TAGAGCTGCTCGAACTCCTCCGAGTGCACATCGGCAAGGCCGGGGCACTCAGCAGGGC 62051 Query 222003 ACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACA 222062 |||| || |||||| || | | ||| | || ||||||||||||||||||||| | Sbjct 62052 ACATGAGGGTCCAGTCTCCGTCGGACTCGACGCGCTTCATGAAGAGGTCCGGGATCCAGA 62111 Query 222063 GCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCA 222122 | || | ||||| || | | ||| ||||||| ||||| ||| || | || || | Sbjct 62112 GAGCGTAGAAGAGGTCACGAGCGCGCATCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCAA 62171 Query 222123 AAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCT 222182 || ||||| | ||| |||||||||||||| || |||| ||| | |||||||| |||| Sbjct 62172 GGAAATCAAACACGTCGGCGTGCCACGGCTCGAGGTAGATGGCAAAGGCGCCGGGGCGCT 62231 Query 222183 TGTTGCCACCCTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCA 222242 ||||||||||||| || || | | |||| | || || || | || || | Sbjct 62232 TGTTGCCACCCTGGTCAACGTAGCGGGCAGTCGCGTCGTAGGCACGGAGCATAGGGACAA 62291 Query 222243 GTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGG 222302 ||||| || |||||||| || |||||||| ||| ||| | | ||| ||| Sbjct 62292 TACCGTTCGAGTAGCCGTTGGTACCGGCAATGTACGAACCCTTGGCGCGAATGTT-GTGG 62350 Query 222303 CAG-ACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCC 222361 | | || ||||||||||| ||||||||| |||||| ||||||||||||| Sbjct 62351 ATGTGGAGACCAATACCACCGGCAGTCTTCGAGATCTGAGCGCAGGTCTTGAGAGTGTCG 62410 Query 222362 ATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGAT 222421 ||||| || || ||||| ||||| | | | || || || ||||||||||| | Sbjct 62411 TAAATGCCGTCAATGGAGTCGTCCTTCATGGCGACAAGGAAGCACGACGACATCTGCGCG 62470 Query 222422 TTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATC 222481 | || | || |||||| || || ||||| ||||| || ||||||| | ||||| Sbjct 62471 TGGGGAGTACCGGCGTTGAAGAGAGTGGGCGACGCGTGAGTGAAGTAGCGCTCGGACATG 62530 Query 222482 AGATCGTACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTC 222541 || | ||| ||||| | ||| | | | | ||| || |||||||| | || | | Sbjct 62531 AGGTTGTAGGTCTCGATGACGCGGTCAAGGTTCTCGCCGTGAATGCCGACAGCAACGCGC 62590 Query 222542 ATGTACATGTACTGGGGCCTCTCCACAGGACCCT--TGGAGCTGGAGAGCAGGTACGATT 222599 ||| ||||| ||| || | ||| | |||| | | | || || |||||||| Sbjct 62591 ATGAGCATGTGCTGCGGGCGCTCGGC--GACCTTGCCGTCGATGCGAAGGAGGTACGAGC 62648 Query 222600 TTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGCGG 222659 || || |||||||| || ||| ||||| ||||| | | ||| | | |||| Sbjct 62649 GCTCAAGCGTCTTGAAGCCGAAGAAGTTGTACGAGAAGTCGCGGTCGTAGATTATTGCGG 62708 Query 222660 CGTCCAGCTCCGACTTGTGCTTTACGCTCAACTCGAAAAAGCGCTCAGACACGAGGGGAG 222719 ||| |||| ||||||||| | ||| || | | || || || | ||| | Sbjct 62709 AGTCAAGCTTGTCCTTGTGCTTCATCGTCACGTCATACACCTCCTGCGAGACCATGGGCG 62768 Query 222720 CGTTCTCTTTGGTGTCGGGGTTAACGTTGTGGTACAGCTGCCACATGGCATCAGAGA--A 222777 | || | ||| | |||||| || || |||||| | || | | |||| | Sbjct 62769 ACTGCTTTCCGGTCTTGGGGTTGACCCAGTTGTACAGGTCGGTGATAACCTGCGAGAAGA 62828 Query 222778 CGTGTCGGGAGTCTGCTTGTGCAGATTCGACACGGCGATCCGAGACGCCAAGATACCATA 222837 | | || | |||| |||||||||||| |||||||| | || | ||| | || |||| Sbjct 62829 CCT-TCTTG-GTCTCCTTGTGCAGATTGGACACGGCCAGACGGGCCGCGAGAATGGCATA 62886 Query 222838 GTCAGGGTG 222846 ||| | ||| Sbjct 62887 GTCGGCGTG 62895 >seq55 Length=129735 Score = 179 bits (198), Expect = 7e-40 Identities = 542/836 (65%), Gaps = 24/836 (3%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| |||||||||||||||| || || |||||||||||| ||||| | || Sbjct 77804 ATCTGGCAGATGTACAAGAAGGCGCAGGCGTCCTTCTGGACCGCCGAGGAGATCAACCTC 77863 Query 25537 GCCAAGGACATGGACGGCTGGTAC-----GCTCTATCCAAAGACGAGCAGCATTTTCTCA 25591 || ||| | ||| |||| || |||| | | | |||||| | || || Sbjct 77864 GCGCCCGACCTCCACGACTGGGACAACAAGCTCAA--CGACAACGAGCGCTACTTCATCG 77921 Query 25592 AGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGA 25651 || ||||| | || ||||| || || || || || || || |||||||| || |||| Sbjct 77922 AGCACGTGCTCGCCTTCTTCGCCGCGTCAGACGGCATCGTCAACGAGAACCTTGTCGAGC 77981 Query 25652 GATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCA 25711 | ||| | | || || ||| || ||||||||| |||||||| |||||||| | Sbjct 77982 GCTTCTGCGGTGAGGTCCAGATCGCCGAGGCCAAGACCTTCTACGGCTTCCAGATCATGA 78041 Query 25712 TCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGACG 25768 | || || | ||||||||| || | ||||| || || ||||| |||| Sbjct 78042 TGGAGAACATCCACTCTGAGACCTACTCT---CTTCTCATCGACACCTACATCCGTGACG 78098 Query 25769 TCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGG 25828 ||| | | || || ||||| ||| ||| ||| ||||||||| ||||| Sbjct 78099 GTGCCCGCCGCAACTACCTCTTCAAGGCCATTGAGACCATCCCCTGCATCAAGAAGAAGG 78158 Query 25829 CGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAG 25888 | ||||| || |||||| | | ||| | |||| | |||||| || | | Sbjct 78159 CCGACTGGGCGCTGCGCTGGATCTCGGACGACAGCTCGTCGTTCGCCGAGCGCCTCATCG 78218 Query 25889 CCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCA 25948 | || ||||| || ||||||||||| ||| || ||||| || | ||||||||||||| Sbjct 78219 CGTTCGCTGCCGTCGAGGGCATCTTCTTCTCGGGCTCGTTCGCCTCGATCTTCTGGCTCA 78278 Query 25949 AGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGG 26008 || || || |||||||| || ||| || |||||||| || | ||||||| Sbjct 78279 AGAAGCGCGGCCTTATGCCCGGTCTTACCTTCTCGAACGAGCTTATTTCGCGCGACGAGG 78338 Query 26009 GTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCTC 26068 | ||||||| || || || ||||| |||| ||| |||| | | || | || | | Sbjct 78339 GCCTCCACACCGACTTCGCATGCCTCCTCTTCAC---CCACCTCCGCCGC-CGCCCCCAC 78394 Query 26069 AAGAGACCGTCT--ACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNNN 26126 | |||| | | | | |||||| ||||| || ||||||||| ||||||| | Sbjct 78395 CCG-GACCTTATTGAGAAGATCATCCGCGAGGCCGTCGAGATCGAGCAGGAGTTCCTCAC 78453 Query 26127 NNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATTGA 26186 | ||||||||| || |||||| |||| ||||| || Sbjct 78454 CGAGGCCCTTCCCGTCTCGCTTATCGGCATGAACGCCAAGCTCATGTGCCAGTACATCGA 78513 Query 26187 GTATGTGGCCGACCATCTGCT-GT-GCCAGCTGGGACTCGCCAGACTCTACAGTACGCCT 26244 || || ||||||| ||||| || ||| || || | ||| ||| | || | Sbjct 78514 GTTCGTCGCCGACCGCCTGCTCGTCGCC--CTCGGCAACCCCAAGATCTGGAACTCGACC 78571 Query 26245 AACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGA 26300 ||||| |||||||| ||||| | || ||| | | || ||| |||||||||| || Sbjct 78572 AACCCCTTCGACTTCATGGAGATGATCTCGCTCCAGGGCAAGGCCAACTTCTTCGA 78627 >seq3 Length=604691 Score = 116 bits (128), Expect = 7e-21 Identities = 168/234 (72%), Gaps = 5/234 (2%) Strand=Plus/Plus Query 25888 GCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTC 25947 || |||||| ||||||||||||||| ||| || || ||||| || |||||||||||| Sbjct 403609 GCATTTGCTTGTGTGGAGGGCATCTTCTTCTCTGGGTCATTTGCAGCAATCTTCTGGCTC 403668 Query 25948 AAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAG 26007 ||| || ||| |||| ||| ||| ||| ||||||||||||| | || ||| Sbjct 403669 AAGAAGCGCGGGCTGATGCGCGGCCTGACCTTCAGCAACGAGCTCATCTCGCGTGATGAG 403728 Query 26008 GGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCT 26067 || | |||| || ||||| || ||||||||| | || | || || | ||| Sbjct 403729 GGCATGCACACCGACTTTGCATGTCTGCTCTACCAGTACCTCAAGCACCGC---TGTTCG 403785 Query 26068 CA-AGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTT 26120 || | ||| || || ||||| ||| |||||||| |||||||||||||| || Sbjct 403786 CAGACAGA-GGTGCACCGTATCGTCAGTGAGGCTGTCGAGATCGAGAAGGAATT 403838 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928842710099200