Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20oleaginosus_20[genbank_20GCA_5F001027345.1_202 015-06-12] 180 sequences; 19,835,558 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq94 105 8e-18 seq55 100 3e-16 seq3 89.7 6e-13 >seq94 Length=67100 Score = 105 bits (116), Expect = 8e-18 Identities = 276/416 (66%), Gaps = 19/416 (5%) Strand=Plus/Minus Query 175275 TGGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCT 175334 |||||||||||||||||| || ||| ||||| |||| || ||||| || ||||| || Sbjct 55834 TGGTGCCAAGATCCCCCGTGGTGCCATTCTCTCGGGACCTCCTGGTACCGGTAAGACTCT 55775 Query 175335 CCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTCATC-CAGTGCTCTGCCGCAA 175393 ||| ||| |||| ||| ||||| | || || || ||| || | || ||| | | Sbjct 55774 CCTTGCCAAGGCCACCGCTGGTGAGGCTAAGGTGCCCTTCTTCTCCGT-CTCGGGTTCCG 55716 Query 175394 ACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCG 175453 | ||||| |||||||| || ||||| ||| || | || || || |||| ||| Sbjct 55715 AGTTTGTCGAGATGTTCGTCGGTGTCGGTCCCTCGCGTGTGCGTGACCTCT------TCG 55662 Query 175454 CCC--GCGAAAATCAA----CCATGTATTGTCTTCATTGATGAGATTGATGCGGTGGGCA 175507 ||| || || | || ||| |||||||||||||| ||||| || || | |||| Sbjct 55661 CCCAGGCCAAGAAGAACGCCCCAGCCATTGTCTTCATTGACGAGATCGACGCTATTGGCA 55602 Query 175508 AGCAACGCAGCGCTGGTGG----TATGCCAGCAAATGACGAGAGAGAACAAACAATTAAT 175563 || || || || || | || | || || |||||| | || || | || Sbjct 55601 AGGCCCGTGGCAAGGGCGGCCACTTTGGCGGC-AACGACGAGCGTGAGTCGACCCTCAAC 55543 Query 175564 CAACTACTCACCGAGATGGATGGCTTTGACAATGAGACTGGCATTGTGGTTATTGCGGCC 175623 || || || |||||||| ||||| | || || |||||| || |||| | Sbjct 55542 CAGCTCCTTGTGGAGATGGACGGCTTCGGCACCAAGGAGCACATTGTTGTGCTTGCCGGT 55483 Query 175624 ACTAATCGCGTGGATATCCTTGATGACGCCCTCCTTCGCCCGGGTCGTTTTGATCG 175679 || || |||| || ||||||| |||||| | || || || |||||||| || Sbjct 55482 ACCAACCGCGCCGACGTCCTTGACCCCGCCCTGATGCGTCCCGGCCGTTTTGACCG 55427 >seq55 Length=129735 Score = 100 bits (110), Expect = 3e-16 Identities = 116/155 (75%), Gaps = 1/155 (1%) Strand=Plus/Plus Query 65063 CTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCG 65122 |||| || |||||||||||||| | ||||| || || ||||| ||||||||||| | Sbjct 78193 CTCG-TCGTTCGCCGAGCGCCTCATCGCGTTCGCTGCCGTCGAGGGCATCTTCTTCTCGG 78251 Query 65123 GGTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCT 65182 | || ||| | | || | ||| | |||||||| || || ||||| || || ||||| Sbjct 78252 GCTCGTTCGCCTCGATCTTCTGGCTCAAGAAGCGCGGCCTTATGCCCGGTCTTACCTTCT 78311 Query 65183 CAAATGAACTTATTTCCCGAGATGAGGGTCTCCAC 65217 | || || |||||||| || || ||||| |||||| Sbjct 78312 CGAACGAGCTTATTTCGCGCGACGAGGGCCTCCAC 78346 >seq3 Length=604691 Score = 89.7 bits (98), Expect = 6e-13 Identities = 112/151 (74%), Gaps = 2/151 (1%) Strand=Plus/Plus Query 65079 GCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGC-GCTA 65137 |||||| | || ||||| ||||||||||| ||||||||||| |||||||| ||| || | Sbjct 403599 GCGCCTCATCGCATTTGCTTGTGTGGAGGGCATCTTCTTCTCTGGGTCATT-TGCAGCAA 403657 Query 65138 TTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTT 65197 | | ||| | |||||||| || || |||| ||||| |||| || || || || | Sbjct 403658 TCTTCTGGCTCAAGAAGCGCGGGCTGATGCGCGGCCTGACCTTCAGCAACGAGCTCATCT 403717 Query 65198 CCCGAGATGAGGGTCTCCACCAGGAGTTTGC 65228 | || |||||||| | ||| || ||||| Sbjct 403718 CGCGTGATGAGGGCATGCACACCGACTTTGC 403748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596568257718400