Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20oleaginosus_20[genbank_20GCA_5F001027345.1_202 015-06-12] 180 sequences; 19,835,558 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq54 107 6e-18 seq34 84.2 6e-11 seq5 84.2 6e-11 >seq54 Length=131832 Score = 107 bits (118), Expect = 6e-18 Identities = 286/437 (65%), Gaps = 0/437 (0%) Strand=Plus/Plus Query 156060 TTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATA 156119 ||||||||||| || || || || |||||| | | || ||| |||||||| | |||| Sbjct 62234 TTGCCACCCTGGTCAACGTAGCGGGCAGTCGCGTCGTAGGCACGGAGCATAGGGACAATA 62293 Query 156120 CCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAATA 156179 || || || ||| ||||| ||| ||| | |||||| | ||||| || || || Sbjct 62294 CCGTTCGAGTAGCCGTTGGTACCGGCAATGTACGAACCCTTGGCGCGAATGTTGTGGATG 62353 Query 156180 TGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAA 156239 || || ||||||||||| | || || || |||||||| ||| | ||| | | || Sbjct 62354 TGGAGACCAATACCACCGGCAGTCTTCGAGATCTGAGCGCAGGTCTTGAGAGTGTCGTAA 62413 Query 156240 ATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCGT 156299 || || ||||| || || || | ||| | | || ||||||| | || | | Sbjct 62414 ATGCCGTCAATGGAGTCGTCCTTCATGGCGACAAGGAAGCACGACGACATCTGCGCGTGG 62473 Query 156300 GGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACATATAA 156359 || || || |||||||| || || || | || ||| | || || | ||||| Sbjct 62474 GGAGTACCGGCGTTGAAGAGAGTGGGCGACGCGTGAGTGAAGTAGCGCTCGGACATGAGG 62533 Query 156360 TCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAGATAGAGACCCTCATC 156419 | ||| ||||| | | ||||| || |||||||| | || || || | ||| Sbjct 62534 TTGTAGGTCTCGATGACGCGGTCAAGGTTCTCGCCGTGAATGCCGACAGCAACGCGCATG 62593 Query 156420 CACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAAGGTATGCGCGTTCC 156479 ||| ||||| || ||||| | | | || || || || || ||||| | ||| || Sbjct 62594 AGCATGTGCTGCGGGCGCTCGGCGACCTTGCCGTCGATGCGAAGGAGGTACGAGCGCTCA 62653 Query 156480 AGAGTTTTAAACCCGAA 156496 || || || || ||||| Sbjct 62654 AGCGTCTTGAAGCCGAA 62670 Score = 95.1 bits (104), Expect = 4e-14 Identities = 216/319 (68%), Gaps = 12/319 (4%) Strand=Plus/Plus Query 302554 TCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTT 302613 || || |||| | | | || ||||| ||||| | || ||||| || ||||| || Sbjct 15851 TCGTACCCAACCTTCAGATCCTCCATGGCCTTGACCAGGCGGCGCTGGATGTAACCGGTC 15910 Query 302614 GTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAAT 302673 || || || || || || || || | ||| ||||||||||||| || |||||||| Sbjct 15911 TCAGCGGTCTTGACGGCCGTGTCGATCAAACCTTCACGACCACCCATGGCGTGGAAGAAG 15970 Query 302674 AGCTCTTCCGGTCGT-AGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGG 302732 | ||||| || ||| || || | | | ||| |||| ||||| ||||||| ||| || Sbjct 15971 AACTCTT-GGGGCGTCAGGCCACGGAGGTACGAGTTCTCGACGAAGCCACGCGACTCTGG 16029 Query 302733 C---GAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGAT 302789 | ||||||| ||||| ||| || |||| || | || ||||| |||| || Sbjct 16030 CCCGTAATCGTC---CTTGGAAAAATGCGGCAATGTGCGGTGGCGGAAGCCGAATGGAAT 16086 Query 302790 ACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATT--TAAA 302847 |||||| || || || | || ||||| | || | ||| ||||| || || | || Sbjct 16087 ACGCTTGCCTTCCACAATTTGTTGTCCTACACAGGCGGACATTTGCGAGATGTTGATGAA 16146 Query 302848 TCACTGCCCTTGGAGCCAG 302866 | | |||||||| |||| Sbjct 16147 TGA--ACCCTTGGATCCAG 16163 >seq34 Length=190830 Score = 84.2 bits (92), Expect = 6e-11 Identities = 109/148 (74%), Gaps = 6/148 (4%) Strand=Plus/Plus Query 251843 CGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGTCCAT 251902 ||||||||||||| ||||| || || || ||||| |||| |||||| | || | Sbjct 119269 CGATAGTCATACGCGACGGAATGGCGTGTGGGTTGATAATGAGGTCGGGCACAATGCCCT 119328 Query 251903 CAGCAGTGAAGGGCATATCCTTTTCCT--CAATA-ATGTTTCCAATAGTTCCCTTTTGTC 251959 ||||||| || ||||| ||| |||| | ||| || | |||||||| ||||| || | Sbjct 119329 CAGCAGTAAACGGCATGTCC---TCCTGGCGATAGGTGATACCAATAGTACCCTTCTGAC 119385 Query 251960 CGTGACGAGAACTGAACTTATCACCAAT 251987 ||||||| || ||||| |||||||| Sbjct 119386 CGTGACGCGACGCAAACTTGTCACCAAT 119413 >seq5 Length=484505 Score = 84.2 bits (92), Expect = 6e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 60143 GTGAAAATATACCTCTCGGATGCTGCGTCCTTGCCACCCATAAGACGGGTTCCAAATTGT 60202 |||||||| || | | || ||| ||||||||||| || | || || ||||| || Sbjct 151547 GTGAAAATGTAACGCGCGCTTGCCGCGTCCTTGCCGCCTTGCATGCGAGTACCAAACTGA 151606 Query 60203 CCGTTTGGCTGGAATAGATTAATGTTGTTAGAGCCTACGAAATTTTGAGCGAGACCAACA 60262 ||||| |||| | ||||| |||||||| ||| || || || || || ||||| ||| Sbjct 151607 CCGTTGGGCTCAAGAAGATTGATGTTGTTGCTGCCGACAAAGTTCTGCGCAAGACCGACA 151666 Query 60263 ATAGCACCATTTAAACTGGCTTCACCGTGATGATATCCAGAATGTTCTGAAACATATCCA 60322 || | | | ||||| ||| ||||| ||||| | |||| || | || || ||| Sbjct 151667 ATGGTCGCCGTCAAACTCTGTTCGCCGTGGTGATACGCCGAATTCTCGGCGACGTAACCA 151726 Query 60323 CTGAATTGTGCGACTTTAATTTCG 60346 | || ||| | || || |||||| Sbjct 151727 CCGAGTTGAACAACCTTGATTTCG 151750 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471814205620660