Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20oleaginosus_20[genbank_20GCA_5F001027345.1_202 015-06-12] 180 sequences; 19,835,558 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq1 89.7 4e-13 seq119 84.2 2e-11 >seq1 Length=646641 Score = 89.7 bits (98), Expect = 4e-13 Identities = 101/133 (76%), Gaps = 2/133 (2%) Strand=Plus/Plus Query 105086 GCACGGCTTTCACGTTCACGAGTTCGGCGATACCAGCAACGGCTGCACGTCCGCCGGCGA 105145 ||||||||| ||||| |||||||||||||| |||| |||| |||| |||| | |||| Sbjct 136461 GCACGGCTTCCACGTGCACGAGTTCGGCGACCTCAGCGACGGGTGCATGTCCACAGGCGC 136520 Query 105146 GCACTTCAACCCTACGCGCCAAAATCACGGCGCTCCAGACGCCGCAGAA-AGGCACGTCG 105204 ||||| ||||||| | || |||||||||| || || | |||| ||||||| | Sbjct 136521 GCACTACAACCCTTTCGGACACGATCACGGCGCCCCGTCCGAC-AAGAACCGGCACGTGG 136579 Query 105205 GCGACCTGGGCAA 105217 | ||||| || || Sbjct 136580 GTGACCTCGGTAA 136592 >seq119 Length=35684 Score = 84.2 bits (92), Expect = 2e-11 Identities = 76/96 (79%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 107670 GATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGAC 107729 || |||||| | ||||||| || || || ||||||||||||| || || ||||| Sbjct 839 GACCAGCAGCGCCTTATTTTCGCCGGCAAGCAGCTGGAGGACGGGCGTACGCTGTCGGAC 780 Query 107730 TACAACATTCAAAAGGAGTCTACGTTGCACATGGTG 107765 ||||||||||| |||||||| ||||||||| | ||| Sbjct 779 TACAACATTCAGAAGGAGTCGACGTTGCACCTCGTG 744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398875924964020