Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20oleaginosus_20[genbank_20GCA_5F001027345.1_202 015-06-12] 180 sequences; 19,835,558 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq55 100 4e-16 seq94 98.7 1e-15 seq3 84.2 3e-11 >seq55 Length=129735 Score = 100 bits (110), Expect = 4e-16 Identities = 116/155 (75%), Gaps = 1/155 (1%) Strand=Plus/Minus Query 122670 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACC 122729 |||||| ||||| || || |||||||| || || |||||| ||||| ||||| || || Sbjct 78346 GTGGAGGCCCTCGTCGCGCGAAATAAGCTCGTTCGAGAAGGTAAGACCGGGCATAAGGCC 78287 Query 122730 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 122789 |||||||| | ||| | || | | ||| || || ||||||||||| ||||| || Sbjct 78286 GCGCTTCTTGAGCCAGAAGATCGAGGCGAACGAGCCCGAGAAGAAGATGCCCTCGACGGC 78227 Query 122790 CGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAG 122824 || ||||| | ||||| |||||||| || |||| Sbjct 78226 AGCGAACGCGATGAGGCGCTCGGCGAACGA-CGAG 78193 >seq94 Length=67100 Score = 98.7 bits (108), Expect = 1e-15 Identities = 169/242 (70%), Gaps = 14/242 (6%) Strand=Plus/Plus Query 11620 CTTGCCCACCGCATCAATCTCATCAATGAAGACAATACATGG----TTGATTTTCGC--G 11673 |||||| | || || ||||| |||||||||||||| ||| || | || || | Sbjct 55600 CTTGCCAATAGCGTCGATCTCGTCAATGAAGACAATGGCTGGGGCGTTCTTCTTGGCCTG 55659 Query 11674 GGCGATTTCAAAGAGATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAA 11733 ||||| |||| || || || | || ||| ||||| || |||||||| ||||| Sbjct 55660 GGCGA------AGAGGTCACGCACACGCGAGGGACCGACACCGACGAACATCTCGACAAA 55713 Query 11734 GTTTGCGGCAGAGCACTG-GATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGA 11792 | | | ||| || | || ||| || || || | ||||| ||| |||| ||| | Sbjct 55714 CTCGGAACCCGAG-ACGGAGAAGAAGGGCACCTTAGCCTCACCAGCGGTGGCCTTGGCAA 55772 Query 11793 GGAGGGTCTTTCCCGTACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCAC 11852 |||| ||||| || ||||| || |||| ||||| ||| || |||||||||||||||| Sbjct 55773 GGAGAGTCTTACCGGTACCAGGAGGTCCCGAGAGAATGGCACCACGGGGGATCTTGGCAC 55832 Query 11853 CA 11854 || Sbjct 55833 CA 55834 >seq3 Length=604691 Score = 84.2 bits (92), Expect = 3e-11 Identities = 110/150 (73%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 122659 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCT 122718 ||||| || ||| | |||||||| || || || || || || |||| || || Sbjct 403748 GCAAAGTCGGTGTGCATGCCCTCATCACGCGAGATGAGCTCGTTGCTGAAGGTCAGGCCG 403689 Query 122719 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGAT 122777 |||| || || |||||||| | ||| | || || ||| |||||||| ||||||||||| Sbjct 403688 CGCATCAGCCCGCGCTTCTTGAGCCAGAAGATTGCTGCA-AATGACCCAGAGAAGAAGAT 403630 Query 122778 ACCCTCCACACACGCAAACGCAAAAAGGCG 122807 ||||||||||| ||||| || | ||||| Sbjct 403629 GCCCTCCACACAAGCAAATGCGATGAGGCG 403600 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628030586928000