Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20oleaginosus_20[genbank_20GCA_5F001027345.1_202 015-06-12] 180 sequences; 19,835,558 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq54 197 2e-45 seq55 118 1e-21 seq3 104 3e-17 seq5 96.9 4e-15 >seq54 Length=131832 Score = 197 bits (218), Expect = 2e-45 Identities = 566/860 (66%), Gaps = 23/860 (3%) Strand=Plus/Plus Query 118704 GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATA 118763 || ||||| || || ||||| || ||||||| |||||| | | |||||| || Sbjct 61751 GGGAGGGCAATCGAGGCCAGGTTGCACACAGCAACCTCATCGGGAGACGAGTACTCGATG 61810 Query 118764 ATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 118823 || || ||||| | ||| || ||| |||||||| | || || || || ||||| | | Sbjct 61811 ATCTCGGTGCAGAGGTTGGACGACTTGATGGTGCCGAGGTGCTGCTGGTTCGACTTCGAG 61870 Query 118824 TTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA 118883 || ||| |||||||| |||||| | || || ||||| || |||| || || || Sbjct 61871 TTGGCCGCGTCCTTGTAGAGCATGAAGGGACCGCCAGTCTCAGTCTGGGCCTCCAGGATG 61930 Query 118884 GCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTT 118942 || ||||| | || || || | | || | | | ||||| ||| ||||| Sbjct 61931 GCGAACCAGAGCTTCTGCGCCTTGATC-GTCTTGCGGCCCTTGCCCTCACGCTCATACTT 61989 Query 118943 TGTGTAGAGGGCTTCAAACTCTTCACCCACGGCC--TCTGAGAGCCCTGGTGCCTTATCT 119000 |||||| || ||||| || | | || || | || || || || | | Sbjct 61990 CTCGTAGAGCTGCTCGAACTCCTC--CGAGTGCACATCGGCAAGGCCGGGGCACTCAGCA 62047 Query 119001 GGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATC 119060 ||||| | ||| | ||| | || | ||| || ||||||||||||||||| |||||| Sbjct 62048 GGGCACATGAGGGTCCAGTCTCCGTCGGACTCGACGCGCTTCATGAAGAGGTCCGGGATC 62107 Query 119061 CAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCT--TCATCCCCCTGATTGAGACGCA 119118 ||||| || ||||||| || ||| ||| || ||| || | || || || || | Sbjct 62108 CAGAGAGCGTAGAAGAGGTCACGA--GCGCGCATCTCCTCCTTGCCGTGGTTCTTGCGGA 62165 Query 119119 ACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCC-- 119176 || | || || | | || ||||||||||| || ||||| | || | | || Sbjct 62166 GGTCAAGGAAATCAAACACGTCGGCGTGCCACGGCTCGAGGTAGATGGCAAAGGCGCCGG 62225 Query 119177 ----CTTACGACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCA 119232 ||| | | ||| |||||| || || | ||||| |||| | |||| |||| Sbjct 62226 GGCGCTT--GTTG-CCACCCTGGTCAACGTAGCGGGCAGTCGCGTCGTAGGCACGGAGCA 62282 Query 119233 TTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAAT--ACGAGACTTATTGGCTCT 119290 | || | ||||| | || | ||| || || || ||| |||| | | |||| | Sbjct 62283 TAGGGACAATACCGTTCGAGTAGCCGTTGGTACCGGCAATGTACGAACCCT--TGGCGCG 62340 Query 119291 GACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGT 119350 | | ||||||||| | ||||||||| || || ||| ||||| || ||||| | | Sbjct 62341 AATGTTGTGGATGTGGAGACCAATACCACCGGCAGTCTTCGAGATCTGAGCGCAGGTCTT 62400 Query 119351 GAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGA 119410 |||| || |||| || || || || ||||| |||| | |||| |||||||| ||| Sbjct 62401 GAGAGTGTCGTAAATGCCGTCAATGGAGTCGTCCTTCATGGCGACAAGGAAGCACGACGA 62460 Query 119411 CATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACC 119470 ||| || | ||| ||||| |||||||||||||| || | |||||| |||| | Sbjct 62461 CATCTGCGCGTGGGGAGTACCGGCGTTGAAGAGAGTGGGCGACGCGTGAGTGAAGTAGCG 62520 Query 119471 TTGGGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGAT 119530 | |||||| || ||||||||| | |||| | || || || |||||||| |||| Sbjct 62521 CTCGGACATGAGGTTGTAGGTCTCGATGACGCGGTCAAGGTTCTCGCCGTGAATGCCGAC 62580 Query 119531 CGAGACCCGCATAAACATGT 119550 | || ||||| | ||||| Sbjct 62581 AGCAACGCGCATGAGCATGT 62600 >seq55 Length=129735 Score = 118 bits (130), Expect = 1e-21 Identities = 167/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 130027 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 130086 |||||| |||||||| || || || || || ||||||||| ||||| ||||| || || Sbjct 78346 GTGGAGGCCCTCGTCGCGCGAAATAAGCTCGTTCGAGAAGGTAAGACCGGGCATAAGGCC 78287 Query 130087 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 130146 |||||||| | |||||| |||| || ||||| ||||||||||| ||||| || Sbjct 78286 GCGCTTCTTGAGCCAGAAGATCGAGGCGAACGAGCCCGAGAAGAAGATGCCCTCGACGGC 78227 Query 130147 CGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCA-AACCACTTCATCG 130205 |||||||| | ||| ||||| || || || || | | || | | ||| || || Sbjct 78226 AGCGAACGCGATGAGGCGCTCGGCGAACGA-CGAGCTGTCGTCCGAGATCCAGCGCAGCG 78168 Query 130206 CCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAG 130257 |||| | ||||| |||| ||| || |||| ||||| || || | ||||| Sbjct 78167 CCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTCTCAATGGCCTTGAAGAG 78116 >seq3 Length=604691 Score = 104 bits (114), Expect = 3e-17 Identities = 113/150 (75%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 130016 GCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 130075 ||||| || ||| | ||||| ||||| |||||||| || || |||| ||| || Sbjct 403748 GCAAAGTCGGTGTGCATGCCCTCATCACGCGAGATGAGCTCGTTGCTGAAGGTCAGGCCG 403689 Query 130076 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 130135 |||| || || |||||||| | |||||| || || |||||| |||||||||||||| Sbjct 403688 CGCATCAGCCCGCGCTTCTTGAGCCAGAAGATTGCTGCAAATGACCCAGAGAAGAAGATG 403629 Query 130136 CCCTCCACACACGCGAACGCAAAGAGACGC 130165 ||||||||||| || || || | ||| ||| Sbjct 403628 CCCTCCACACAAGCAAATGCGATGAGGCGC 403599 >seq5 Length=484505 Score = 96.9 bits (106), Expect = 4e-15 Identities = 232/341 (68%), Gaps = 15/341 (4%) Strand=Plus/Plus Query 179730 CAACTTGAGGAGCGATGGCCAGAAGTAGTGGATCATATTGAGGATGAGACCCTTAATGTG 179789 || ||| ||||| || || ||||||||| || | |||| |||||||||||| || || Sbjct 152272 CATCTTCAGGAGGGAGGGGTAGAAGTAGTCGAGGAAGTTGATGATGAGACCCTTGATATG 152331 Query 179790 TGAACCATCGTTATCCGCATCCGTCATAATCATAAGCCGACCATAGCGAA-GCT-CGGAA 179847 ||||||||||| ||| || ||||| ||||| ||| |||| ||||||| ||| || Sbjct 152332 TGAACCATCGTGGTCCTGGTCAGTCATGATCATGAGCTGACCGTAGCGAAGGCTGTCCAA 152391 Query 179848 ACATCTTGATAATCCTTACCTTGTTGAAGACCCAAGATCTTCTTGA-GATCATTGAA-CT 179905 | | | ||| | | | || | ||||||| ||||| ||||| | || |||| || Sbjct 152392 AGAGGT--ATAGTTGTGATTGTGCTTCAGACCCAGGATCTGCTTGATGTTC--TGAATCT 152447 Query 179906 CTTGGTTTGATGTGAGTTG--CGCCACTGAAGCATCTCGGACATTTTTACACTTCCCACG 179963 | || ||| || || ||| || || |||||||| ||| || || Sbjct 152448 CGACATTCTTCATGATCTGCTCGTGGCTG--GCCTCACGGACATTGAGCAGCTTGCCGCG 152505 Query 179964 GAGAGGGAACACACCGTAGTGATCACGACCAACCA---CAGAGAGACCAGCAACTGCGAG 180020 ||||| || |||||| | | || || || | | || ||| || | || ||||| Sbjct 152506 AAGAGGAAAGACACCGAAATTGTCGCGCCCCCCGATGGCACCGAGGCCGGACACAGCGAG 152565 Query 180021 GGTCTTCGCGGAATCACCCTCCGTCACGATGAGCGTACACT 180061 | ||| ||||||||||| || || | |||||| ||||||| Sbjct 152566 TGCCTTGGCGGAATCACCTTCAGTGAGGATGAGGGTACACT 152606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618433808520800