Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20oleaginosus_20[genbank_20GCA_5F001027345.1_202 015-06-12] 180 sequences; 19,835,558 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq54 158 1e-33 seq55 113 5e-20 seq3 113 5e-20 seq5 91.5 2e-13 seq94 87.8 2e-12 >seq54 Length=131832 Score = 158 bits (174), Expect = 1e-33 Identities = 358/535 (67%), Gaps = 9/535 (2%) Strand=Plus/Minus Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGT 104280 ||| ||| ||||| |||||||||| || |||| ||||| || || || |||| || Sbjct 62608 CCCGCAGCACATGCTCATGCGCGTTGCTGTCGGCATTCACGGCGAGAACCTTGACCGCGT 62549 Query 104281 CTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTT 104340 | | ||||| ||| || |||||| | | |||| |||||| | || || ||||| Sbjct 62548 CATCGAGACCTACAACCTCATGTCCGAGCGCTACTTCACTCACGCGTCGCCCACTCTCTT 62489 Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400 ||| || ||||| || | || ||||| ||||||||| |||||| ||||| || Sbjct 62488 CAACGCCGGTACTCCCCACGCGCAGATGTCGTCGTGCTTCCTTGTCGCCATGAAGGACGA 62429 Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460 ||| || |||| || || | ||||| | | || || || ||||| ||| || || Sbjct 62428 CTCCATTGACGGCATTTACGACACTCTCAAGACCTGCGCTCAGATCTCGAAGACTGCCGG 62369 Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 104520 |||||||| | |||||||| | | | ||||| || ||| || || || Sbjct 62368 TGGTATTGGTCTCCACATCCACAACATTCGCGCCAAGGGTTCGTACATTGCCGGTACCAA 62309 Query 104521 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 104580 || | || | |||||| | || ||||| || | | |||| || || ||||| || Sbjct 62308 CGGCTACTCGAACGGTATTGTCCCTATGCTCCGTGCCTACGACGCGACTGCCCGCTACGT 62249 Query 104581 AAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCATGGCACG 104636 | || | ||| | | | | || | | || |||| || ||||| ||||||| Sbjct 62248 TGACCAGGGTGG-CAACAAGCGCCCCGGCGCCTTTGCCATCTACCTCGAGCCGTGGCACG 62190 Query 104637 CGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAG--GCGCGGTG 104694 | || | | || |||||||| | || ||||| || | |||||| ||||| | Sbjct 62189 CCGACGTGTTTGATTTCCTTGACCTCCGCAAGAACCACGGCAAGGAGGAGATGCGCGCT- 62131 Query 104695 CCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAG 104749 || || ||||||| |||||||||||| || || |||||||||||| | || ||| Sbjct 62130 -CGTGACCTCTTCTACGCTCTCTGGATCCCGGACCTCTTCATGAAGCGCGTCGAG 62077 >seq55 Length=129735 Score = 113 bits (124), Expect = 5e-20 Identities = 115/150 (77%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 94795 TCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCC 94854 || || || ||||| ||| |||| || || || ||||| ||||||||||| || || Sbjct 78197 TCGTTCGCCGAGCGCCTCATCGCGTTCGCTGCCGTCGAGGGCATCTTCTTCTCGGGCTCG 78256 Query 94855 TTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 94914 ||| | | || | |||||||||||||| || || ||||| ||||| |||||| ||| Sbjct 78257 TTCGCCTCGATCTTCTGGCTCAAGAAGCGCGGCCTTATGCCCGGTCTTACCTTCTCGAAC 78316 Query 94915 GAGCTTATCTCTCGTGACGAGGGACTCCAC 94944 |||||||| || || |||||||| |||||| Sbjct 78317 GAGCTTATTTCGCGCGACGAGGGCCTCCAC 78346 >seq3 Length=604691 Score = 113 bits (124), Expect = 5e-20 Identities = 117/151 (77%), Gaps = 2/151 (1%) Strand=Plus/Plus Query 94806 GCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGC-GCTA 94864 ||| ||| |||||||||| ||||| ||||| |||||||||||||| || || ||| || | Sbjct 403599 GCGCCTCATCGCATTTGCTTGTGTGGAGGGCATCTTCTTCTCTGGGTCATT-TGCAGCAA 403657 Query 94865 TTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCT 94924 | | |||||||||||||| || || |||| || || |||| ||||||||| |||| Sbjct 403658 TCTTCTGGCTCAAGAAGCGCGGGCTGATGCGCGGCCTGACCTTCAGCAACGAGCTCATCT 403717 Query 94925 CTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 | ||||| ||||| | ||| || ||||| Sbjct 403718 CGCGTGATGAGGGCATGCACACCGACTTTGC 403748 >seq5 Length=484505 Score = 91.5 bits (100), Expect = 2e-13 Identities = 214/322 (66%), Gaps = 6/322 (2%) Strand=Plus/Plus Query 168454 CGCATCCTTACCACC---CATGAGACGCGTACCAAACTGACCACACGGCTCAAGAAGATT 168510 ||| ||||| || || |||| || |||||||||||||| |||||||||||||| Sbjct 151570 CGCGTCCTTGCCGCCTTGCATGCGA---GTACCAAACTGACCGTTGGGCTCAAGAAGATT 151626 Query 168511 GATATTGTTTGAACCCATGTAGTCATTCGCCAACTTGACAATCGTGTCCGCGAGAGAGAC 168570 ||| ||||| || | ||| | ||| | |||||| || ||| | | Sbjct 151627 GATGTTGTTGCTGCCGACAAAGTTCTGCGCAAGACCGACAATGGTCGCCGTCAAACTCTG 151686 Query 168571 TTCACCGTGGTGGTACGCACTCTTCTCTGCGACAAATGCCGCCAACTGCGCCACTTTCAT 168630 ||| |||||||| ||||| ||||| ||||| | | | | || | || || || Sbjct 151687 TTCGCCGTGGTGATACGCCGAATTCTCGGCGACGTAACCACCGAGTTGAACAACCTTGAT 151746 Query 168631 CTCATCCTTGAGATTCTTGTGGAAGCATGCGTACATAACCTTGCGTTGCGAAGGCTTGAG 168690 || |||| ||||| | ||||| || |||| |||||||| || || ||||| Sbjct 151747 TTCGCCCTTCAGATTGCGCTTAAAGCAACCGAACATGACCTTGCGCTGACCCGGTTTGAG 151806 Query 168691 ACCATCCGCCATGTGTGCGATAGAACGCTTCAAGTCCGCCAAACTGAAGTTGACGAGGTC 168750 ||||||||| | || ||| || || | |||||||| |||| || ||| || Sbjct 151807 ACCATCCGCAACTGATGGGATCGATCGTATGTTGTCCGCCATGGAGAAGAGGATGAGTTC 151866 Query 168751 CTTGTGTACAAAGTTTGAGATG 168772 ||||| ||||||| |||||| Sbjct 151867 CTTGTTGACAAAGTCCGAGATG 151888 >seq94 Length=67100 Score = 87.8 bits (96), Expect = 2e-12 Identities = 157/229 (69%), Gaps = 8/229 (3%) Strand=Plus/Plus Query 9704 GCATCAATCTCATCAATGAAGACGATGCATGG----TTGATTTTCGCGAGCGACTTCAAA 9759 || || ||||| ||||||||||| ||| ||| || | || || | | | || Sbjct 55610 GCGTCGATCTCGTCAATGAAGACAATGGCTGGGGCGTTCTTCTTGGCCTGGG----CGAA 55665 Query 9760 GAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA 9819 ||| || || |||||| || || ||||| || |||||||| ||||| | | | || Sbjct 55666 GAGGTCACGCACACGCGAGGGACCGACACCGACGAACATCTCGACAAACTCGGAACCCGA 55725 Query 9820 ACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACC 9879 || |||||| || |||| ||||| || |||| ||| || ||||||||||| Sbjct 55726 GACGGAGAAGAAGGGCACCTTAGCCTCACCAGCGGTGGCCTTGGCAAGGAGAGTCTTACC 55785 Query 9880 CGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCA 9928 ||||| || |||| ||| | |||||| || || |||||||| ||| Sbjct 55786 GGTACCAGGAGGTCCCGAGAGAATGGCACCACGGGGGATCTTGGCACCA 55834 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583259487663200