Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20oleaginosus_20[genbank_20GCA_5F001027345.1_202 015-06-12] 180 sequences; 19,835,558 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq54 284 1e-71 seq5 140 4e-28 >seq54 Length=131832 Score = 284 bits (314), Expect = 1e-71 Identities = 532/775 (69%), Gaps = 10/775 (1%) Strand=Plus/Minus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGAC-TACACGCGTGTCCGTGAGACGTAC 53251 |||||||||| || | || || ||||| || || | || || ||| ||||| ||| Sbjct 62594 TCATGCGCGTTGCTGTCGGCATTCACGGCGAGAACCTTGAC-CGCGTCATCGAGACCTAC 62536 Query 53252 GACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACG 53311 || | ||| | | ||||| || ||||| |||| || || |||||||| ||||| Sbjct 62535 AACCTCATGTCCGAGCGCTACTTCACTCACGCGTCGCCCACTCTCTTCAACGCCGGTACT 62476 Query 53312 AATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGC 53371 ||| | ||||||||| |||||||| || || |||||||| ||||| || |||||| Sbjct 62475 CCCCACGCGCAGATGTCGTCGTGCTTCCTTGTCGCCATGAAGGACGACTCCATTGACGGC 62416 Query 53372 ATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATC 53431 || ||||| || |||||| || || || ||||| ||| | |||||||| ||| || Sbjct 62415 ATTTACGACACTCTCAAGACCTGCGCTCAGATCTCGAAGACTGCCGGTGGTATTGGTCTC 62356 Query 53432 CACTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGAT 53491 ||| | ||| | || || || || | || || || |||||| | | | Sbjct 62355 CACATCCACAACATTCGCGCCAAGGGTTCGTACATTGCCGGTACCAACGGCTACTCGAAC 62296 Query 53492 GGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGT 53551 || || || ||||||||||| | || | || || ||||| ||||| |||||||||| Sbjct 62295 GGTATTGTCCCTATGCTCCGTGCCTACGACGCGACTGCCCGCTACGTTGACCAGGGTGGC 62236 Query 53552 GGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAG 53611 |||||| || | || |||||||||||||||||||||||||||||| | | || Sbjct 62235 AACAAGCGCCCCGGCGCCTTTGCCATCTACCTCGAGCCGTGGCACGCCGACGTGTTTGAT 62176 Query 53612 TTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTT-TAC 53670 || || || || || ||| || || | || ||||||||| |||||||| || ||| Sbjct 62175 TTCCTTGACCTCCGCAAGAACCACGGCAAGGAGGAGATGCGCGCTCGTGACCTCTTCTAC 62116 Query 53671 AGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCT 53730 ||||| ||||| ||||||||||||||| | || ||| |||| || ||| ||| Sbjct 62115 -GCTCTCTGGATCCCGGACCTCTTCATGAAGCGCGTCGAGTCCGACGGAGACTGGACCCT 62057 Query 53731 GATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGAGAT 53790 |||||||| |||||||||||||| | ||| || |||||||| | || | Sbjct 62056 CATGTGCCCTGCTGAGTGCCCCGGCCTTGCCGATGTGCACTCGGAGGAGTTCGAGCAGCT 61997 Query 53791 GTATCGGACGTACGCAGTTCAGGGC---CGCTACAAGAAGAAGGTCAAGGCGCGTGAGGT 53847 || || ||| | | ||||| || ||||| || ||||||||| || | Sbjct 61996 CTACGAGAAGTATGAGCGTGAGGGCAAGGGCCGCAAGACGA---TCAAGGCGCAGAAGCT 61940 Query 53848 ATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGGA 53907 ||| || ||||| || |||| ||||| || || | |||| ||||||||| Sbjct 61939 CTGGTTCGCCATCCTGGAGGCCCAGACTGAGACTGGCGGTCCCTTCATGCTCTACAAGGA 61880 Query 53908 TTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGGCGTCATCAAATCGAGCAAC 53962 ||| |||| |||| |||||| || || ||||| |||||| ||| |||| Sbjct 61879 CGCGGCCAACTCGAAGTCGAACCAGCAGCACCTCGGCACCATCAAGTCGTCCAAC 61825 Score = 105 bits (116), Expect = 7e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 55728 TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTG 55787 |||||| |||||| |||||| |||||||| | |||||| | ||||| | || Sbjct 61076 TCAAGGCCATTTACAAGACGGTCTGGGAGATCTCGCAGAAGGCCGTCATTGAGCTTGCTG 61017 Query 55788 CTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTT 55847 | || ||||| |||| |||||||||||| ||||| ||||||||| | || ||| || | Sbjct 61016 CCGACCGTGGAGCGTTCATCGACCAGTCGCAGTCGCTGAACATCCACCTGTCGAACCCCT 60957 Query 55848 CACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTA 55907 | | | || | | ||||||||||| | ||| |||||| || || ||||| || Sbjct 60956 CGTTCTCGCAGCTCACTTCGATGCACTTCTTCGGCTGGAAGCGCGGTCTAAAGACTGGCG 60897 Query 55908 TGTACTATCTGCGGACCC 55925 |||||| || || |||| Sbjct 60896 CGTACTACCTCCGCACCC 60879 Score = 86.0 bits (94), Expect = 7e-12 Identities = 129/182 (71%), Gaps = 6/182 (3%) Strand=Plus/Minus Query 55097 GACTTTGACAAGCTTCACGAAGTGACGCGTGTTGTGACTCGGAACCTGAACCGGGTCATC 55156 ||||| | ||| | ||||| | || | || || ||| |||||| ||| ||||||| Sbjct 61719 GACTTCCAGAAGTTGCACGACATCACCAGGGTCGTCACTAAGAACCTCGACCAGGTCATC 61660 Query 55157 GACAAGAATTACTACCCG---ACTGAAGCGGCGCGCAAGTCCAACCTCCGGCACCGGCCC 55213 | || |||||||| | ||| ||||||||| |||||| | || ||||| ||| Sbjct 61659 ACCCGCAACTACTACCCCGTCATTGA---GGCGCGCAACTCCAACATGCGTCACCGCCCC 61603 Query 55214 ATCGCCATCGGTGTACAGGGCTTGGCCGACATCTTCATGATGCTCGGATTGCCCTTCGAC 55273 ||| | ||||| |||||| | ||||| | ||||||| ||| | ||||||||||| Sbjct 61602 GTCGGTCTTGGTGTCCAGGGCCTCGCCGATACCTTCATGGCTCTCCGCATGCCCTTCGAC 61543 Query 55274 TC 55275 || Sbjct 61542 TC 61541 >seq5 Length=484505 Score = 140 bits (154), Expect = 4e-28 Identities = 308/455 (68%), Gaps = 10/455 (2%) Strand=Plus/Plus Query 117152 CCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAGAAC 117211 |||||||| || || || || || || || || | | |||||| ||||| |||| || Sbjct 151394 CCAGTTCCAATGCCGTCGGCCCCGTTGATGAGGACTAGGGGCACGGTAGGAAGGTAGTAC 151453 Query 117212 TCAGGCTCCACCTGCAGACCGTCGTCCGTGACGTACTTGAGCACCG---CATTGTCACTC 117268 || ||||| | || | ||||| ||| ||| ||| ||||| | | ||| ||| Sbjct 151454 TCCGGCTCAATGCGCTGGCCGTCCTCCATGAGGTAGTTGAGAAGTGGGTCATCGTCG--- 151510 Query 117269 GGATCGAATATGTTCTTGGTCCACGGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCA 117328 || | ||| | ||| || | | | |||||||||||||| | |||||| Sbjct 151511 GGGTGGAACACAGCGCGCGTCATCGCAGATGTGGTGGTGAAAATGTAACGCGCGCTTGCC 151570 Query 117329 GCATCCTTGCCACCA-GCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAG 117387 || |||||||| || ||| | || ||||| || || || | ||||| | || || | Sbjct 151571 GCGTCCTTGCCGCCTTGCATG-CGAGTACCAAACTGACCGTTGGGCTCAAGAAGATTGAT 151629 Query 117388 GTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGGAGGCTCGCCTC 117447 ||||||| ||| |||||||| || || | |||||| || | | ||| || Sbjct 151630 GTTGTTGCTGCCGACAAAGTTCTGCGCAAGACCGACAATGGTCGCCGTCAAACTCTGTTC 151689 Query 117448 ACCATGGTGATACGCCGTCTGCTCCGCCACGTAGCCCGCCAGCTGAGCCACCTTCATGTC 117507 || ||||||||||||| | ||| || ||||| || | || ||| | ||||| || || Sbjct 151690 GCCGTGGTGATACGCCGAATTCTCGGCGACGTAACCACCGAGTTGAACAACCTTGATTTC 151749 Query 117508 TGACGTCAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGCGCTGACTTGGCTTCAGACC 117567 | |||| || ||| | ||| | | || ||||||||||||| || || ||||| Sbjct 151750 GCCCTTCAGATTGCGCTTAAAGCAACCGAACATGACCTTGCGCTGACCCGGTTTGAGACC 151809 Query 117568 ATCCGCCACGTGA-GGGATCGAACGCTTGATGTCC 117601 |||||| || ||| |||||||| || || ||||| Sbjct 151810 ATCCGCAAC-TGATGGGATCGATCGTATGTTGTCC 151843 Score = 134 bits (148), Expect = 2e-26 Identities = 306/457 (67%), Gaps = 10/457 (2%) Strand=Plus/Plus Query 151874 ATCCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGGCGTAAA 151933 |||| || || ||||| || || ||||||| || | | ||||| |||| ||| Sbjct 151392 ATCCAGTTCCAATGCCGTCGGCCCCGTTGATGAGGACTAGGGGCACGGTAGGAAGGTAGT 151451 Query 151934 ACTCCGGCTCCACCTGTTGACCGTCATCCATCACGTATTTCAAAACGGAATTGTCAGCCG 151993 |||||||||| | | || ||||| ||||| | ||| || | || | | || | | Sbjct 151452 ACTCCGGCTCAATGCGCTGGCCGTCCTCCATGAGGTAGTTGAGAAGTGGGTCATCGTCGG 151511 Query 151994 GATCGAATATCCGTCGAGTCATAGGACTCAAACGCG----TGAAGATGTATCGGGAGCTG 152049 | | ||| | || ||||| | || | | | |||| ||||| || | ||| Sbjct 151512 GGTGGAACACAGCGCGCGTCATCG----CAGATGTGGTGGTGAAAATGTAACGCGCGCTT 151567 Query 152050 GCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTG 152109 ||||| |||||||| ||| || || || |||||||| || |||||| || || ||| Sbjct 151568 GCCGCGTCCTTGCCGCCTTGCATGCGAGTACCAAACTGACCGTTGGGCTCAAGAAGATTG 151627 Query 152110 AGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCT 152169 | ||||||| ||| || || ||||| || | | ||||| || || || |||| | Sbjct 151628 ATGTTGTTGCTGCCGACAAAGTTCTGCGCAAGACCGACAATGGTCGCCGTCAAACTCTGT 151687 Query 152170 TCACCGTGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAACTGCGCCACCTTCATG 152229 || |||||||||||||||| | ||| |||| ||| || | | || | ||||| || Sbjct 151688 TCGCCGTGGTGATACGCCGAATTCTCGGCGACGTAACCACCGAGTTGAACAACCTTGATT 151747 Query 152230 TCCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTGGGATGGTTTCAAA 152289 || | |||| || ||| | || || | || ||||||||||| ||||| | | Sbjct 151748 TCGCCCTTCAGATTGCGCTTAAAGCAACCGAACATGACCTTGCGCTGACCCGGTTTGAGA 151807 Query 152290 CCGTCCACCACGTGA-GGAATCGAACGCTTGATGTCC 152325 || ||| | || ||| || ||||| || || ||||| Sbjct 151808 CCATCCGCAAC-TGATGGGATCGATCGTATGTTGTCC 151843 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547214768764000