Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20oleaginosus_20[genbank_20GCA_5F001027345.1_202 015-06-12] 180 sequences; 19,835,558 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq119 134 1e-26 seq2 104 2e-17 >seq119 Length=35684 Score = 134 bits (148), Expect = 1e-26 Identities = 170/234 (73%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 26984 CGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACC 27043 || ||||||||| || || || ||||||||||||||| | || || ||||| || || | Sbjct 1235 CGGCATGCAGATCTTCGTCAAGACTCTGACCGGCAAGACGATCACCCTTGAGGTCGAGTC 1176 Query 27044 GTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGA 27103 ||| ||| |||| || | ||||| || || || ||||| || ||||| ||||| || Sbjct 1175 GTCAGACACGATCGACAACGTCAAGAGCAAGATCCAGGACAAGGAGGGCATTCCACCTGA 1116 Query 27104 TCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTA 27163 || |||||| | || | || ||||| || | || ||| | || | ||||| || Sbjct 1115 CCAGCAGCGTCTCATCTTTGCTGGCAAGCAGCTTGAGGACGGGCGCACTCTCTCCGACTA 1056 Query 27164 CAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||||||| |||||||| ||| | || | ||| ||||| | || || ||||| Sbjct 1055 CAACATTCAGAAGGAGTCTACCCTCCACCTCGTTCTGCGTCTCCGCGGCGGCAT 1002 Score = 105 bits (116), Expect = 6e-18 Identities = 133/183 (73%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 27008 TCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAA 27067 |||||| |||||| | ||||| || || || || | || ||| ||||||| | ||||| Sbjct 933 TCTGACTGGCAAGACCATTACGCTCGAGGTCGAGTCCTCTGACACGATTGACAACGTCAA 874 Query 27068 ACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGG 27127 || || || ||||| || ||||| || ||||| || ||||| | || | |||||| Sbjct 873 GAGCAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGCCTTATTTTCGCCGG 814 Query 27128 CAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTT 27187 ||| || |||| ||| | || | || || ||||||||||| ||||||||||| || Sbjct 813 CAAGCAGCTGGAGGACGGGCGTACGCTGTCGGACTACAACATTCAGAAGGAGTCGACGTT 754 Query 27188 ACA 27190 || Sbjct 753 GCA 751 Score = 98.7 bits (108), Expect = 9e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 27009 CTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAA 27068 || ||||||||| | || || ||||| || || | || ||| | || || | ||||| Sbjct 1438 CTCACCGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACTATCGACAACGTCAAG 1379 Query 27069 CAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGC 27128 || ||||| ||||| || ||||| || ||||| || |||||| | || | ||||||| Sbjct 1378 TCCAAGATTCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGTCTTATCTTCGCCGGC 1319 Query 27129 AAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTA 27188 || || | || ||| | || | ||||| ||||||||||| |||||||| || | Sbjct 1318 AAGCAGCTCGAGGACGGGCGCACTCTCTCCGACTACAACATTCAGAAGGAGTCCACTCTC 1259 Query 27189 CATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || | || | ||| | || || ||||| Sbjct 1258 CACCTTGTCCTTCGTCTTCGTGGCGGCAT 1230 >seq2 Length=620658 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || || || |||||| | || ||||| || || || | || Sbjct 114475 ATGCAGATTTTCGTCAAGACCCTCACGGGCAAGACCATCACTCTCGAGGTCGAGTCCTCG 114416 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || || || ||||| || ||||| || ||||| || Sbjct 114415 GACACCATCGACAACGTCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAG 114356 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | ||| ||||| || | || ||| | ||| |||| || |||||| Sbjct 114355 CAGCGCCTCATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAAC 114296 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || |||||||||||| | || | ||| | ||| | || || || || Sbjct 114295 ATCCAGAAGGAGTCGACCCTCCACCTCGTTCTTCGTCTTCGCGGCGGTAT 114246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434917421433600