Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20oleaginosus_20[genbank_20GCA_5F001027345.1_202 015-06-12] 180 sequences; 19,835,558 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq119 141 2e-28 seq2 129 1e-24 seq14 109 1e-18 >seq119 Length=35684 Score = 141 bits (156), Expect = 2e-28 Identities = 150/198 (76%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | |||||||||||||||||||| || || || | ||||| |||| | ||| Sbjct 1238 ACGAAGACGAAGGACAAGGTGGAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAGAGAGT 1297 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||| || || |||||||| || ||||||||||| || || |||||||| || || || Sbjct 1298 GCGCCCGTCCTCGAGCTGCTTGCCGGCGAAGATAAGACGCTGCTGGTCGGGAGGGATGCC 1357 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| || ||||| ||| || ||||| ||||| |||| || || || | Sbjct 1358 CTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATAGTGTCCGAGGACTCGACCTCAAG 1417 Query 225672 CGTGATCGTCTTGCCCGT 225689 ||||| |||||||| || Sbjct 1418 GGTGATGGTCTTGCCGGT 1435 Score = 138 bits (152), Expect = 3e-27 Identities = 163/221 (74%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 || || | ||| || |||||||| || || || || || | ||||| |||| | ||| Sbjct 1011 CGGAGACGCAGAACGAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTG 1070 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | ||| || || |||||||| ||||| ||||| || || || ||||| || ||||| || Sbjct 1071 CGCCCGTCCTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCAGGTGGAATGCCC 1130 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 |||||||| |||||||| ||| || ||||| |||||||| | || || || | Sbjct 1131 TCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATCGTGTCTGACGACTCGACCTCAAGG 1190 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||||||||||| |||| ||| || | ||| | ||||| Sbjct 1191 GTGATCGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 1231 >seq2 Length=620658 Score = 129 bits (142), Expect = 1e-24 Identities = 161/221 (73%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||| | || || |||||||| || || || || |||| ||||| || | | || Sbjct 114255 CGAAGACGAAGAACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTG 114314 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | || || || |||||||| ||||||||||| || || || |||||||| || || || Sbjct 114315 CGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGGGGGATGCCC 114374 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 |||||||| |||||||| ||| || ||||||||||| |||| || || || | Sbjct 114375 TCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCCGAGGACTCGACCTCGAGA 114434 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| ||||||||||| | || || | ||| | ||||| Sbjct 114435 GTGATGGTCTTGCCCGTGAGGGTCTTGACGAAAATCTGCAT 114475 >seq14 Length=296601 Score = 109 bits (120), Expect = 1e-18 Identities = 119/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 || || || |||||||| || |||||||| || || || |||||||| || || || ||| Sbjct 201533 CCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCC 201592 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 ||||| |||||||| ||| || ||||| ||||| |||| || || || | ||| Sbjct 201593 TTGTCCTGGATCTTGGACTTGACGTTGTCGATCGTGTCGGAGGACTCGACCTCGAGGGTG 201652 Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || ||||||||||||| ||| || | ||| | ||||| Sbjct 201653 ATGGTCTTGCCCGTCAGAGTCTTGACGAAGATCTGCAT 201690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192528449724920