Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20oleaginosus_20[genbank_20GCA_5F001027345.1_202 015-06-12] 180 sequences; 19,835,558 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq23 98.7 7e-16 >seq23 Length=236427 Score = 98.7 bits (108), Expect = 7e-16 Identities = 236/346 (68%), Gaps = 11/346 (3%) Strand=Plus/Minus Query 27385 GGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACG 27444 |||||||| |||| || ||||||||||| ||| ||||| | |||||| |||| Sbjct 36401 GGGTTCCACGCGCTCATGATGATGCGCCGGTCGGTCGGGTTTTCCCTGATCTTCCGCACG 36342 Query 27445 GCGTTTTGC-AGCTGATCCACCCCCATCCCCGAGTAGTC-TACCCTCATGTCCGTGTACT 27502 | || || ||||| ||||| || |||| | |||||| | | || || | ||| Sbjct 36341 AC-TTCCGCGAGCTGGTCCACGCCTTTCCCGGTGTAGTCGTCTTCGCACGTGC-CATACG 36284 Query 27503 CTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGT 27562 | || ||||| || | ||| ||||| |||||||| || || ||||| ||||| ||||| Sbjct 36283 CAGCGCCGAAGTGGCGCCACTGGAAGCCGTACACGGGCCCGAGGTCGCCCTCGCGCCTGT 36224 Query 27563 GCTCGAAGCCCCTC-TTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTA-- 27619 | || ||||| | ||| | || || | || ||||| |||||||||| | | Sbjct 36223 GGCCG-AGCCCGACGCGGTCGAGGAACTCGCGCGACCCGTTCCCGTCCCAGATGTGCACG 36165 Query 27620 CCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCT 27679 || | | || | |||| | | || ||| | || ||||||||| || ||||| | Sbjct 36164 CCGCGTGCTTG--GAGCACCGCCGCGTCGGTGCAGCCCGCGACGAACCAGAGGAGCTCTT 36107 Query 27680 CCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAG-GGGAA 27724 | |||||| | ||| ||||| | || ||||| || || ||||| Sbjct 36106 CGACGACGCCGCGCCAGAAGACGCGTTTCGTCGTCAGCAGCGGGAA 36061 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369506389393580