Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20oleaginosus_20[genbank_20GCA_5F001027345.1_202 015-06-12] 180 sequences; 19,835,558 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq55 100 4e-16 >seq55 Length=129735 Score = 100 bits (110), Expect = 4e-16 Identities = 149/209 (71%), Gaps = 3/209 (1%) Strand=Plus/Minus Query 48183 TCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCG 48242 ||||| || || || ||||||||||| || || || || |||||||| || || | ||| Sbjct 78318 TCGTTCGAGAAGGTAAGACCGGGCATAAGGCCGCGCTTCTTGAGCCAGAAGATCGAGGCG 78259 Query 48243 AAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTA- 48301 || || || || ||||| ||||| || ||||| || || ||| | || | ||| || | Sbjct 78258 AACGAGCCCGAGAAGAAGATGCCCTCGACGGCAGCGAACGCGATGAGGCGCTCGGCGAAC 78199 Query 48302 -ACTGGCT-TCGTTGTGTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGC 48359 || ||| |||| ||||| || | ||||| || ||||||||||| | || || Sbjct 78198 GACGAGCTGTCGTCCGAGATCCAGCGCAGCGCCCAGTCGGCCTTCTTCTTGATGCAGGGG 78139 Query 48360 ATTGTTTCTATAGCATTAAAGAGAAAGTT 48388 || || || || || || ||||| |||| Sbjct 78138 ATGGTCTCAATGGCCTTGAAGAGGTAGTT 78110 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694667236995200