Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cutaneotrichosporon_20oleaginosus_20[genbank_20GCA_5F001027345.1_202 015-06-12] 180 sequences; 19,835,558 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq2 159 7e-34 seq119 154 3e-32 seq14 150 4e-31 seq5 89.7 1e-12 seq55 86.0 1e-11 >seq2 Length=620658 Score = 159 bits (176), Expect = 7e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| || || || ||||| || || || | || || || |||||||||||||| | Sbjct 114248 ACCGCCGCGAAGACGAAGAACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGA 114307 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| |||||||| ||||| || || || || || ||||| | || || ||||| || Sbjct 114308 AAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGGGG 114367 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| |||||||| | || ||| | ||||| |||||||| | ||||| Sbjct 114368 GATGCCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCCGAGGACTCGAC 114427 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||||||||| ||||| ||||| | ||||| ||||| |||||||| Sbjct 114428 CTCGAGAGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAAATCTGCAT 114475 >seq119 Length=35684 Score = 154 bits (170), Expect = 3e-32 Identities = 151/192 (79%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || || || ||||||||||| | || ||||| || ||||| || || || || |||||| Sbjct 1041 TCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGCCCGTCCTCAAGCTGCTTGCCAGCAAAG 1100 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGT 283027 || | ||| || |||||| ||||| ||||||||||| |||||| ||||| || ||| | Sbjct 1101 ATGAGACGCTGCTGGTCAGGTGGAATGCCCTCCTTGTCCTGGATC-TTGCTCTTGACGTT 1159 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 ||||| ||||| || | ||||| || || ||||||||||| || |||| |||||| || Sbjct 1160 GTCGATCGTGTCTGACGACTCGACCTCAAGGGTGATCGTCTTGCCGGTCAGAGTCTTGAC 1219 Query 283088 GAATATCTGCAT 283099 ||| |||||||| Sbjct 1220 GAAGATCTGCAT 1231 Score = 127 bits (140), Expect = 4e-24 Identities = 150/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || ||||| || ||||| || || || | ||| || || || ||||||||||| | Sbjct 1233 CCGCCACGAAGACGAAGGACAAGGTGGAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAG 1292 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||| || ||||| || || || ||||| ||||| | ||| || ||||| || Sbjct 1293 AGAGTGCGCCCGTCCTCGAGCTGCTTGCCGGCGAAGATAAGACGCTGCTGGTCGGGAGGG 1352 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| || ||||| | || ||| | |||||||||||||| | ||||| Sbjct 1353 ATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATAGTGTCCGAGGACTCGACC 1412 Query 283053 TCGAGAGTGATCGTCTTACCCGT 283075 || || ||||| ||||| || || Sbjct 1413 TCAAGGGTGATGGTCTTGCCGGT 1435 Score = 113 bits (124), Expect = 9e-20 Identities = 150/206 (73%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || ||||| || || || || || || ||||| || || || ||||||||||| | Sbjct 727 CCGCCACGGAGACGGAGCACGAGGTGCAACGTCGACTCCTTCTGAATGTTGTAGTCCGAC 786 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 ||||| || || ||||| || || || ||||| || || | || || ||||| || Sbjct 787 AGCGTACGCCCGTCCTCCAGCTGCTTGCCGGCGAAAATAAGGCGCTGCTGGTCGGGAGGG 846 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| |||||| ||||| || ||| | || || ||||| || | ||||| Sbjct 847 ATGCCCTCCTTGTCCTGGATC-TTGCTCTTGACGTTGTCAATCGTGTCAGAGGACTCGAC 905 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCA 283077 ||||| || || ||||| || |||| Sbjct 906 CTCGAGCGTAATGGTCTTGCCAGTCA 931 >seq14 Length=296601 Score = 150 bits (166), Expect = 4e-31 Identities = 140/178 (79%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 282922 TGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTT 282981 ||||||| | ||| |||||||| ||||| || || || ||||| ||||| | ||| || | Sbjct 201513 TGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCT 201572 Query 282982 GGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCG 283041 |||| || || ||||||||||| |||||||| | || ||| | ||||| ||||| | Sbjct 201573 GGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATCGTGTCGG 201632 Query 283042 AAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 | | ||||| ||||| ||||| ||||| ||||||| |||||| ||||| |||||||| Sbjct 201633 AGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGAGTCTTGACGAAGATCTGCAT 201690 >seq5 Length=484505 Score = 89.7 bits (98), Expect = 1e-12 Identities = 193/284 (68%), Gaps = 6/284 (2%) Strand=Plus/Plus Query 273780 GTGAAAATGTACCTGGCACTCGCATGGTCCTTGCCACCTTGCAGCCTCGAACCAAACTGA 273839 ||||||||||| | || || || ||||||||| ||||||| | | |||||||||| Sbjct 151547 GTGAAAATGTAACGCGCGCTTGCCGCGTCCTTGCCGCCTTGCATGCGAGTACCAAACTGA 151606 Query 273840 CCCTCGGGCAGTAGCCAGTTTATGTTGTTGCTACCGACGTAATCCTGAGCCATATTCACG 273899 || | |||| || || ||||||||||| ||||| | | ||| || | | || Sbjct 151607 CCGTTGGGCTCAAGAAGATTGATGTTGTTGCTGCCGACAAAGTTCTGCGCAAGACCGACA 151666 Query 273900 ATAGTC-CCCTGAAGGGATACCTCGCCGTGGTGATAGGCGCTGTGTTCGGCGATATAACC 273958 || ||| || | || | |||||||||||||| || | ||||||| ||||| Sbjct 151667 ATGGTCGCCGTCAAACTCT-GTTCGCCGTGGTGATACGCCGAATTCTCGGCGACGTAACC 151725 Query 273959 ACTGAACTGAGCAACCTTCACATCGCTCGTCAAGTTTCGCTTGAA--TGCGGAATACAAC 274016 || || ||| ||||||| | |||| | ||| || ||||| || | || ||| Sbjct 151726 ACCGAGTTGAACAACCTTGATTTCGCCCTTCAGATTGCGCTTAAAGCAACCGA--ACATG 151783 Query 274017 ACCTTCCGCTGCGAGGGCTTGAACCCATCAACGACCGATGGAAT 274060 ||||| ||||| || |||| ||||| | || ||||| || Sbjct 151784 ACCTTGCGCTGACCCGGTTTGAGACCATCCGCAACTGATGGGAT 151827 >seq55 Length=129735 Score = 86.0 bits (94), Expect = 1e-11 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 230223 CTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATT 230282 |||||||||||||| || | |||||| | || || ||||| ||||| || || || | Sbjct 78473 CTTATCGGCATGAACGCCAAGCTCATGTGCCAGTACATCGAGTTCGTCGCCGACCGCCTG 78532 Query 230283 TTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAG 230342 |||| || || || || || | | ||||| | |||||||||| || |||||| Sbjct 78533 CTCGTCGCCCTCGGCAACCCCAAGATCTGGAACTCGACCAACCCCTTCGACTTCATGGAG 78592 Query 230343 CTCATTTCACTCCAGGGGAAAACTAACTTCTTCGA 230377 | || || |||||||| || | ||||||||||| Sbjct 78593 ATGATCTCGCTCCAGGGCAAGGCCAACTTCTTCGA 78627 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046736785957720