Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cystobasidiopsis_20lactophilus_20[genbank_20GCA_5F001599975.1_202016 -03-01] 19 sequences; 22,180,604 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq5 140 4e-28 >seq5 Length=3070904 Score = 140 bits (154), Expect = 4e-28 Identities = 227/324 (70%), Gaps = 2/324 (1%) Strand=Plus/Minus Query 145535 ATTAGACCGCCATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGT 145594 || |||| | ||| ||||| ||| || ||| || | ||||||| ||| | |||||| Sbjct 777858 ATCAGACGGACATGACCATGTCGATTTTCGGGTGCGGCTTGTAGCCCACCACCTCAAAGT 777799 Query 145595 CCTCCGCCCTGAAGTCATCTATGTCCTCCACCCGCCTCAGGATCCTGAGCCTGGGAAAGG 145654 |||| | | ||| || || | |||| | || || | ||| |||| ||| Sbjct 777798 CCTCGGACGTGACCTCGTCCACCTCCTTCCTTGGCGTCTTCCACACCAGCTTGGGGAAGT 777739 Query 145655 GCCGGGGGCTCCTG-GTCAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGC 145713 |||||| ||| | || ||||||| || |||||| ||||||| ||||||||| Sbjct 777738 CCCGGGG-CTCGCGCGTGAGCTGGACGCCCAAGGGCTCGACGTGGTCCTTGTAGACGTGG 777680 Query 145714 GCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATG 145773 ||||| || || | |||||| ||| |||||| | | |||| || |||| ||| Sbjct 777679 GCGTCGCCGAGCTGGAGGATGAGCTCCTTCGGCTCGGTGTCGGTGATTTGAGCGAGGATG 777620 Query 145774 TAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAG 145833 | ||| |||| || |||| ||| |||||||||||||| || || |||| ||| ||||| Sbjct 777619 TGGGTGAGCAAGGCGTAGGAGGCGATGTTGAAGGGCACGCCGAGGCCCAGGTCGGCCGAG 777560 Query 145834 CGCTGGTACAGCTGGCAGGAGAGC 145857 |||||||||| |||||||||| Sbjct 777559 CGCTGGTACATGAAGCAGGAGAGC 777536 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590076659856760