Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cystobasidiopsis_20lactophilus_20[genbank_20GCA_5F001599975.1_202016 -03-01] 19 sequences; 22,180,604 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq2 111 2e-19 seq1 86.0 7e-12 >seq2 Length=4543988 Score = 111 bits (122), Expect = 2e-19 Identities = 118/154 (77%), Gaps = 4/154 (3%) Strand=Plus/Plus Query 43032 TCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCC 43091 || |||||||| |||||||| || || ||||||||||||| ||| | || |||||||||| Sbjct 1346992 TCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCC 1347051 Query 43092 ATGATTTTTTGTTTG--AGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGG 43149 ||| || ||| ||||||| | || |||||||||||| || || | ||||||| Sbjct 1347052 TGGATCTTGGCCTTGACAGCGTCG--ATCGAGTCGCTCGATTCGACTTCCAAGGTGATGG 1347109 Query 43150 TTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | || || || | ||||| || ||||| ||||| Sbjct 1347110 TCTTCCCAGTCAAGGTCTTGACGAAGATCTGCAT 1347143 >seq1 Length=5326569 Score = 86.0 bits (94), Expect = 7e-12 Identities = 110/149 (74%), Gaps = 10/149 (7%) Strand=Plus/Minus Query 43040 CTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTT 43099 ||| ||||| || || || ||||||||||||| ||| | || |||||||||| ||| || Sbjct 2644780 CTTTCCAGCRAAGATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTT 2644721 Query 43100 TTGTTTGA--GCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTG 43154 |||| |||||| | || ||| |||| || || || | |||||||| ||| Sbjct 2644720 CGCCTTGACGGCGTCG--ATCGAGTCGGAGCTC---TCGACTTCCAAGGTGATGGTCTTG 2644666 Query 43155 CCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || | ||||| |||||||||||||| Sbjct 2644665 CCGGTCAAGGTCTTGACAAAGATTTGCAT 2644637 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571817464193320