Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cystobasidiopsis_20lactophilus_20[genbank_20GCA_5F001599975.1_202016 -03-01] 19 sequences; 22,180,604 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq2 114 2e-21 >seq2 Length=4543988 Score = 114 bits (126), Expect = 2e-21 Identities = 112/142 (79%), Gaps = 2/142 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| || || | |||| || || || |||||||| || ||||||||||| ||||| Sbjct 1598244 GCCAAGCGCCACCGAAAGATC-CTACGTGACAACATCCAGGGCATCACCAAGCCCGCTAT 1598186 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| ||||| || ||||||||||| ||||||||| ||||||| | |||| || |||| Sbjct 1598185 CCGCCGTCTCGCACGTCGTGGTGGTGTCAAGCGTATCTCTGGCCTCATCTACGAGGAGAC 1598126 Query 16552 TCGTGATGTTTTGAAGATCTTC 16573 |||| || | ||||||||| Sbjct 1598125 CCGTGGCGTCCTCAAGATCTTC 1598104 Score = 89.7 bits (98), Expect = 8e-14 Identities = 96/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 16497 GTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTG 16556 |||| || |||||||| || ||||||||| ||||||| | |||| || |||| || | Sbjct 555272 GTCTCGCGCGTCGTGGCGGTGTCAAGCGTATCTCTGGCCTCATCTACGAGGAGACCCGCG 555213 Query 16557 ATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACG 16616 ||| ||||||||||||||| ||| ||| ||| ||| | || || |||||||||| Sbjct 555212 GTGTCTTGAAGATCTTCCTCGAGAACGTCATCAGGGATTCCGTCACTTACACCGAGCACG 555153 Query 16617 CTAAACG 16623 | || || Sbjct 555152 CCAAGCG 555146 Score = 89.7 bits (98), Expect = 8e-14 Identities = 96/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 16497 GTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTG 16556 |||| || |||||||| || ||||||||| ||||||| | |||| || |||| || | Sbjct 579634 GTCTCGCGCGTCGTGGCGGTGTCAAGCGTATCTCTGGCCTCATCTACGAGGAGACCCGCG 579693 Query 16557 ATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACG 16616 ||| ||||||||||||||| ||| ||| ||| ||| | || || |||||||||| Sbjct 579694 GTGTCTTGAAGATCTTCCTCGAGAACGTCATCAGGGATTCCGTCACTTACACCGAGCACG 579753 Query 16617 CTAAACG 16623 | || || Sbjct 579754 CCAAGCG 579760 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075182628167