Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cystobasidiopsis_20lactophilus_20[genbank_20GCA_5F001599975.1_202016 -03-01] 19 sequences; 22,180,604 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq1 114 1e-20 seq2 86.0 6e-12 >seq1 Length=5326569 Score = 114 bits (126), Expect = 1e-20 Identities = 255/383 (67%), Gaps = 0/383 (0%) Strand=Plus/Minus Query 145106 GACGTGAAGGGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGC 145165 || ||| | || || || ||||||| ||||||| ||| || | ||||| ||||| ||| Sbjct 1975243 GAGGTGTAAGGCTCGAAGCACTCGTTGTTGCCCAAGATCTGGGAGGTCGACGCGGTCGGC 1975184 Query 145166 ATGTACGCCACCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTA 145225 ||| ||| ||||| || |||||||||||| |||| | ||||| || || Sbjct 1975183 ATGGGCGCAACCAACAAGCTGTTGCGCAGGCCGCCGGCGATGATCTTCTCCTTGAGGCTA 1975124 Query 145226 CCCCAATCCCATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCG 145285 |||| ||||| || | || || | ||| ||||||||||| |||| | |||| | Sbjct 1975123 TCCCACTCCCAAAGGGTGGTAGGGGTGACGCCCCACATGTCGAACTGAAGCTCGCCCCTG 1975064 Query 145286 CTGGCGGGGCTGCCTTGAAAGGAACTGTAACTGCCCCAAGTTTTGGCGAGCTCGCAACTC 145345 || |||||||| || |||| |||| |||| ||||||||||| | Sbjct 1975063 GACGCTGGGCTGCCCTGGAAGGTTGAGTAAGGGCCCTCTTCGATGGCGAGCTCGTTGGAC 1975004 Query 145346 GCCTCCAGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCA 145405 |||| |||||| || || || |||||| || ||| |||| || || || | Sbjct 1975003 ACCTCGAGAGCGGCGTGGTAGATGGTCTCGTGGATCTGCTTGTTCAGGAGACGGGCGGCG 1974944 Query 145406 TCGCTCTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACG 145465 || | |||||||||||| | || || |||||||| || || | || ||| Sbjct 1974943 GGAGAGTCAAAAGGCATGCGCAGCGCCATGAACGCGTCGGCGAGACCTTGAACACCAACG 1974884 Query 145466 CCGATGGGCCGATGTTTCATGTT 145488 |||||||| || || |||||| Sbjct 1974883 CCGATGGGTCGGTGCCGCATGTT 1974861 Score = 113 bits (124), Expect = 4e-20 Identities = 168/230 (73%), Gaps = 9/230 (4%) Strand=Plus/Minus Query 46234 GGCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATATCGCGCGACGAGGGCCTGCAT 46293 ||| ||||||||||||| || || ||||||||| || || ||||||||||||||||| Sbjct 653920 GGCCTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCCCGCGACGAGGGCCTGCAC 653861 Query 46294 ACGGACTTTGCGTGTCT-CTACTATAACA-CTCGCGTGCACGACAAGCTTGCGCCCGACA 46351 || |||||||| || || || | | || ||| | || |||| | | || |||| Sbjct 653860 ACCGACTTTGCCTGCCTCCTCTTCTCCCACCTCAAGCGC-CGAC---CCCAC-CCAGACA 653806 Query 46352 CCGTGCTGAGCATGTTCAAGGAGGCGGTGGCCATTGAGAAGGAGTTTTTTACGGCCGCAC 46411 |||| | ||| || ||||||| || | |||||||||||||| |||| | ||| | Sbjct 653805 CCGTCAAGGCCATCATCGAGGAGGCCGTCGAGATTGAGAAGGAGTTCCTTACCGACGCCC 653746 Query 46412 TGCCCGCTGCCCTGCTGGGCATGAACG-CACAGTCAATGTGCGACTACAT 46460 |||||| |||| | |||||||||| ||| || ||| || | ||||| Sbjct 653745 TGCCCGTCTCCCTCATCGGCATGAACGCCACCCTC-ATGCGCCAGTACAT 653697 >seq2 Length=4543988 Score = 86.0 bits (94), Expect = 6e-12 Identities = 77/97 (79%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| || |||||||| ||| || ||| || |||||| ||||||||||| ||| ||| Sbjct 1345909 CCTTCTGGATGTTGTAGTCGGACAAGGTCCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGA 1345968 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTC 131141 | || ||||||||||| || ||||| || || ||||| Sbjct 1345969 TCAAGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTC 1346005 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012687896960