Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cystobasidiopsis_20lactophilus_20[genbank_20GCA_5F001599975.1_202016 -03-01] 19 sequences; 22,180,604 total letters Query= NC_008187.1 Length=191100 Score E Sequences producing significant alignments: (Bits) Value seq1 95.1 1e-14 seq4 84.2 3e-11 >seq1 Length=5326569 Score = 95.1 bits (104), Expect = 1e-14 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 15044 CGCACGCCCGAGATTGGCGACAAGTTTTGCTCTGGTATGGCGCAAAAGGGCACGTGCGGC 15103 |||| ||| || | |||||||||||| ||| || | ||||||||||| |||| Sbjct 1396785 CGCATTCCCCAGGTCGGCGACAAGTTTGCGTCTCGTCACGGTCAAAAGGGCACAGTCGGC 1396844 Query 15104 ATGATTTTCCCCCAGGAAGACATGCCCTTTACCGCGTCAGGCATGACGCCCGACATTATC 15163 || | | || ||| ||||||||||| || || | ||| | ||||||||||| ||| Sbjct 1396845 ATCACCTACCGCCAAGAAGACATGCCGTTCACTGTTGACGGCCTAACGCCCGACATCATC 1396904 Query 15164 ATCAACCCCAACTGCATCCCGTCCCGCATGACCAT 15198 |||||||| || ||| ||||| || |||||||| Sbjct 1396905 ATCAACCCTCACGCCATTCCGTCTCGAATGACCAT 1396939 >seq4 Length=3119897 Score = 84.2 bits (92), Expect = 3e-11 Identities = 125/175 (71%), Gaps = 2/175 (1%) Strand=Plus/Minus Query 15023 AAGGTTGTCATTGGCCAGATGCGCACGCCCGAGATTGGCGACAAGTTTTGCTCTGGTATG 15082 ||||| |||| |||| | ||| |||||| | ||||||||||| |||| | Sbjct 2564456 AAGGTGCTCATGCGCCAAACCCGCCAACCCGAGCTCGGCGACAAGTTCAGCTCGCGCCAC 2564397 Query 15083 GCGCAAAAGGGCACGTGCGGCATGATTTTCCCCCAGGAAGACATGCCCTTTACCG-CGTC 15141 | ||| ||||| |||||| |||| | || || || ||||||||||| | | || | Sbjct 2564396 GGGCAGAAGGGTGTCTGCGGCTTGATCGTGCCTCAAGAGGACATGCCCTTCTCGGACGAC 2564337 Query 15142 AGGCATGACGCCCGACATTATCATCAACCCCAACTGCATCCCGTCCCGCATGACC 15196 ||||| | || ||||| ||||| ||||| || || |||||||||| |||||| Sbjct 2564336 -GGCATCAACCCAGACATCATCATGAACCCGCACGGCTTCCCGTCCCGAATGACC 2564283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611391854794400