Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cystobasidiopsis_20lactophilus_20[genbank_20GCA_5F001599975.1_202016 -03-01] 19 sequences; 22,180,604 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq1 89.7 4e-13 >seq1 Length=5326569 Score = 89.7 bits (98), Expect = 4e-13 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || ||||| ||||||||||| ||||| ||||| ||||| || || || ||||| |||||| Sbjct 2644431 AAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAACAGCGCCTCATCTTTGCTGGCAAA 2644490 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406 || | ||||| | | ||| | || || |||||||||||||| Sbjct 2644491 CAACTCGAGGACGGCAGGACCCTGTCTGACTACAACATTCAAAA 2644534 Score = 87.8 bits (96), Expect = 2e-12 Identities = 123/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 22234 AAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGAT 22293 || || || ||||| || || |||| | || || || | | |||| | | |||| Sbjct 2645402 AAGACCTTGACCGGCAAGACCATCACCTTGGAGGTCGAGAGCTCCGACTCGATCGACGCC 2645461 Query 22294 ATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTT 22353 |||| || || || ||||||||||| || ||||| || || ||||| || || ||| Sbjct 2645462 GTCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCACCTGACCAGCAACGCCTGATCTTT 2645521 Query 22354 GCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406 || ||||| ||||| |||||| | | ||| | ||||| |||||||| || || Sbjct 2645522 GCTGGCAAGCAGTTGGAGGATGGCAGGACCCTGTCCGACTACAACATCCAGAA 2645574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727902806735