Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cystobasidiopsis_20lactophilus_20[genbank_20GCA_5F001599975.1_202016 -03-01] 19 sequences; 22,180,604 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq1 104 2e-17 seq2 82.4 7e-11 >seq1 Length=5326569 Score = 104 bits (114), Expect = 2e-17 Identities = 109/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 126971 TTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTC 127030 |||||||| |||||| |||||||| ||||| || ||||||||||||||| ||| ||| Sbjct 2644779 TTTCCAGCRAAGATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTTC 2644720 Query 127031 TGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTC 127090 ||||| |||| | ||| | ||||||||||| | ||| | || ||||||||| Sbjct 2644719 GCCTTGACGGCGTCGATCGAGTCGGAGCTCTCGACTTCCAAGGTGATGGTCTTGCCGGTC 2644660 Query 127091 AGAGTTTTTACAAAAATCTGCATG 127114 | || || ||||| || |||||| Sbjct 2644659 AAGGTCTTGACAAAGATTTGCATG 2644636 >seq2 Length=4543988 Score = 82.4 bits (90), Expect = 7e-11 Identities = 110/153 (72%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 126962 TCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCC 127021 || ||||| || |||||| |||||| |||||||| ||||| || ||||||||||||||| Sbjct 1346992 TCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCC 1347051 Query 127022 GTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTT 127081 ||| || ||||| |||| | ||| | |||||||| | ||| | || Sbjct 1347052 TGGATCTTGGCCTTGACAGCGTCGATCGAGTCGCTCGATTCGACTTCCAAGGTGATGGTC 1347111 Query 127082 TTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || || |||| || || || || ||||||||| Sbjct 1347112 TTCCCAGTCAAGGTCTTGACGAAGATCTGCATG 1347144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500687068560